RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ABLIM1O14639 778 aa15.06■□□□□ 0
CHD4-201ENST00000357008 INSRRP14616 1297 aa15.06■□□□□ 0
CHD4-201ENST00000357008 IL1R1P14778 569 aa15.06■□□□□ 0
CHD4-201ENST00000357008 NUMBP49757 651 aa15.06■□□□□ 0
CHD4-201ENST00000357008 ATP12AP54707 1039 aa15.06■□□□□ 0
CHD4-201ENST00000357008 OVOS1Q6IE37 1185 aa15.06■□□□□ 0
CHD4-201ENST00000357008 RNF180Q86T96 592 aa15.06■□□□□ 0
CHD4-201ENST00000357008 FBXO30Q8TB52 745 aa15.06■□□□□ 0
CHD4-201ENST00000357008 PLEKHG4BQ96PX9 1271 aa15.06■□□□□ 0
CHD4-201ENST00000357008 GSTK1Q9Y2Q3 226 aa15.06■□□□□ 0
CHD4-201ENST00000357008 H3BRB1 525 aa15.06■□□□□ 0
CHD4-201ENST00000357008 HDAC3O15379 428 aa15.06■□□□□ 0
CHD4-201ENST00000357008 SLC27A1Q6PCB7 646 aa15.06■□□□□ 0
CHD4-201ENST00000357008 POLNQ7Z5Q5 900 aa15.06■□□□□ 0
CHD4-201ENST00000357008 ULK2Q8IYT8 1036 aa15.06■□□□□ 0
CHD4-201ENST00000357008 PANX3Q96QZ0 392 aa15.06■□□□□ 0
CHD4-201ENST00000357008 TUT1Q9H6E5 874 aaKnown RBP15.06■□□□□ 0
CHD4-201ENST00000357008 POLR1BQ9H9Y6 1135 aa15.06■□□□□ 0
CHD4-201ENST00000357008 KLHL1Q9NR64 748 aa15.06■□□□□ 0
CHD4-201ENST00000357008 EHD3Q9NZN3 535 aa15.06■□□□□ 0
CHD4-201ENST00000357008 DYRK3O43781 588 aa15.05■□□□□ 0
CHD4-201ENST00000357008 RBM44Q6ZP01 1051 aaKnown RBP15.05■□□□□ 0
CHD4-201ENST00000357008 PROX1Q92786 737 aa15.05■□□□□ 0
CHD4-201ENST00000357008 ATP13A1Q9HD20 1204 aa15.05■□□□□ 0
CHD4-201ENST00000357008 FSCN2O14926 492 aa15.05■□□□□ 0
CHD4-201ENST00000357008 EDF1O60869 148 aaKnown RBP15.05■□□□□ 0
CHD4-201ENST00000357008 ACAT1P24752 427 aaKnown RBP15.05■□□□□ 0
CHD4-201ENST00000357008 IL2P60568 153 aa15.05■□□□□ 0
CHD4-201ENST00000357008 DLG4P78352 724 aa15.05■□□□□ 0
CHD4-201ENST00000357008 MZT2BQ6NZ67 158 aa15.05■□□□□ 0
CHD4-201ENST00000357008 UNC5AQ6ZN44 842 aa15.05■□□□□ 0
CHD4-201ENST00000357008 UXS1Q8NBZ7 420 aa15.05■□□□□ 0
CHD4-201ENST00000357008 SYNDIG1Q9H7V2 258 aa15.05■□□□□ 0
CHD4-201ENST00000357008 AAASQ9NRG9 546 aa15.05■□□□□ 0
CHD4-201ENST00000357008 LEF1Q9UJU2 399 aaPredicted RBP15.05■□□□□ 0
CHD4-201ENST00000357008 PRPF19Q9UMS4 504 aaKnown RBP15.05■□□□□ 0
CHD4-201ENST00000357008 TTLL13PA6NNM8 815 aa15.05■□□□□ -0
CHD4-201ENST00000357008 H3BMM5 538 aa15.05■□□□□ -0
CHD4-201ENST00000357008 ADCY6O43306 1168 aa15.05■□□□□ -0
CHD4-201ENST00000357008 OR56A5P0C7T3 313 aa15.05■□□□□ -0
CHD4-201ENST00000357008 HPCAL1P37235 193 aa15.05■□□□□ -0
CHD4-201ENST00000357008 NAA20P61599 178 aa15.05■□□□□ -0
CHD4-201ENST00000357008 KLHL12Q53G59 568 aa15.05■□□□□ -0
CHD4-201ENST00000357008 MTSS1LQ765P7 747 aa15.05■□□□□ -0
CHD4-201ENST00000357008 IQCKQ8N0W5 287 aa15.05■□□□□ -0
CHD4-201ENST00000357008 BPIFB6Q8NFQ5 453 aa15.05■□□□□ -0
CHD4-201ENST00000357008 ZNF624Q9P2J8 865 aaPredicted RBP15.05■□□□□ -0
CHD4-201ENST00000357008 RAP2CQ9Y3L5 183 aa15.05■□□□□ -0
CHD4-201ENST00000357008 LOC100506127A0A0U1RQW1 187 aa15.05■□□□□ -0
CHD4-201ENST00000357008 PRR23AA6NEV1 266 aa15.05■□□□□ -0
CHD4-201ENST00000357008 SEC24AO95486 1093 aa15.05■□□□□ -0
CHD4-201ENST00000357008 PSMB4P28070 264 aa15.05■□□□□ -0
CHD4-201ENST00000357008 FMO4P31512 558 aa15.05■□□□□ -0
CHD4-201ENST00000357008 ZNF157P51786 506 aaPredicted RBP15.05■□□□□ -0
CHD4-201ENST00000357008 BNIP2Q12982 314 aa15.05■□□□□ -0
CHD4-201ENST00000357008 SYT12Q8IV01 421 aa15.05■□□□□ -0
CHD4-201ENST00000357008 STK40Q8N2I9 435 aa15.05■□□□□ -0
CHD4-201ENST00000357008 OR52K1Q8NGK4 314 aa15.05■□□□□ -0
CHD4-201ENST00000357008 SERAC1Q96JX3 654 aa15.05■□□□□ -0
CHD4-201ENST00000357008 SEMA4BQ9NPR2 832 aaPredicted RBP15.05■□□□□ -0
CHD4-201ENST00000357008 RBAK-RBAKDNI3L0D1 243 aa15.05■□□□□ -0
CHD4-201ENST00000357008 SPTLC1O15269 473 aa15.05■□□□□ -0
CHD4-201ENST00000357008 GRIA4P48058 902 aa15.05■□□□□ -0
CHD4-201ENST00000357008 ZNF143P52747 638 aaPredicted RBP15.05■□□□□ -0
CHD4-201ENST00000357008 CASP7P55210 303 aa15.05■□□□□ -0
CHD4-201ENST00000357008 FOLH1Q04609 750 aa15.05■□□□□ -0
CHD4-201ENST00000357008 PIWIL4Q7Z3Z4 852 aaKnown RBP15.05■□□□□ -0
CHD4-201ENST00000357008 RTL3Q8N8U3 475 aaKnown RBP15.05■□□□□ -0
CHD4-201ENST00000357008 ALG9Q9H6U8 611 aa15.05■□□□□ -0
CHD4-201ENST00000357008 SLCO1B3Q9NPD5 702 aa15.05■□□□□ -0
CHD4-201ENST00000357008 ZNF112Q9UJU3 913 aa15.05■□□□□ -0
CHD4-201ENST00000357008 CRYL1Q9Y2S2 319 aa15.05■□□□□ -0
CHD4-201ENST00000357008 IFRD1O00458 451 aaPredicted RBP15.04■□□□□ -0
CHD4-201ENST00000357008 ZMPSTE24O75844 475 aa15.04■□□□□ -0
CHD4-201ENST00000357008 CSNK2BP67870 215 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ZNF438Q7Z4V0 828 aa15.04■□□□□ -0
CHD4-201ENST00000357008 PHACTR4Q8IZ21 702 aa15.04■□□□□ -0
CHD4-201ENST00000357008 HASPINQ8TF76 798 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ZBTB45Q96K62 511 aaPredicted RBP15.04■□□□□ -0
CHD4-201ENST00000357008 CEP152O94986 1710 aa15.04■□□□□ -0
CHD4-201ENST00000357008 CASTOR2A6NHX0 329 aa15.04■□□□□ -0
CHD4-201ENST00000357008 TNFRSF21O75509 655 aa15.04■□□□□ -0
CHD4-201ENST00000357008 GLRA2P23416 452 aa15.04■□□□□ -0
CHD4-201ENST00000357008 CASP5P51878 434 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ACSM2AQ08AH3 577 aa15.04■□□□□ -0
CHD4-201ENST00000357008 TMEM63BQ5T3F8 832 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ACSM2BQ68CK6 577 aa15.04■□□□□ -0
CHD4-201ENST00000357008 GLIS3Q8NEA6 775 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ADAM32Q8TC27 787 aa15.04■□□□□ -0
CHD4-201ENST00000357008 PFKFB4Q16877 469 aa15.04■□□□□ -0
CHD4-201ENST00000357008 TMCO1Q9UM00 188 aa15.04■□□□□ -0
CHD4-201ENST00000357008 PCDHB5Q9Y5E4 795 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ELAVL2Q12926 359 aaKnown RBP15.04■□□□□ -0
CHD4-201ENST00000357008 UBAP2LQ14157 1087 aaKnown RBP15.04■□□□□ -0
CHD4-201ENST00000357008 BBS12Q6ZW61 710 aa15.04■□□□□ -0
CHD4-201ENST00000357008 TRABD2AQ86V40 505 aa15.04■□□□□ -0
CHD4-201ENST00000357008 RDH11Q8TC12 318 aa15.04■□□□□ -0
CHD4-201ENST00000357008 S100ZQ8WXG8 99 aa15.04■□□□□ -0
CHD4-201ENST00000357008 LENG1Q96BZ8 264 aaPredicted RBP15.04■□□□□ -0
CHD4-201ENST00000357008 TKTL2Q9H0I9 626 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms