RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 TMEM159Q96B96 161 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 PANX3Q96QZ0 392 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 ZYG11BQ9C0D3 744 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 PRR23AA6NEV1 266 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 PGK1P00558 417 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
TNPO2-201ENST00000356861 DUSP28Q4G0W2 176 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 C9orf57Q5W0N0 161 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 FAM35AQ86V20 835 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 FBXO6Q9NRD1 293 aaPredicted RBP18.35■□□□□ 0.53
TNPO2-201ENST00000356861 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 NOCTQ9UK39 431 aaKnown RBP18.35■□□□□ 0.53
TNPO2-201ENST00000356861 DOLKQ9UPQ8 538 aa18.35■□□□□ 0.53
TNPO2-201ENST00000356861 MSH3P20585 1137 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 INHBEP58166 350 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 PYDC1Q8WXC3 89 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 MAFBQ9Y5Q3 323 aaPredicted RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 HDAC3O15379 428 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 PCNAP12004 261 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 ICAM3P32942 547 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 PSEN1P49768 467 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 HADHBP55084 474 aaKnown RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 SLC25A3Q00325 362 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 BOP1Q14137 746 aaKnown RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 ATG16L2Q8NAA4 619 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 MCOLN3Q8TDD5 553 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 NMD3Q96D46 503 aaKnown RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 B3GNT5Q9BYG0 378 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 RABGEF1Q9UJ41 708 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 SEC22BO75396 215 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 PFKFB4Q16877 469 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 OTUD3Q5T2D3 398 aaPredicted RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 TTC27Q6P3X3 843 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 FIG4Q92562 907 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 PCDHGC3Q9UN70 934 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 AFDNP55196 1824 aaKnown RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 M0R2N6 131 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 CKBP12277 381 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 LBPP18428 481 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 CDKN2BP42772 138 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 GABRB2P47870 512 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 GRIA4P48058 902 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 AIF1P55008 147 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 NCALDP61601 193 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 MRPS22P82650 360 aaKnown RBP18.34■□□□□ 0.53
TNPO2-201ENST00000356861 LPPQ93052 612 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 AKAP12Q02952 1782 aa18.34■□□□□ 0.53
TNPO2-201ENST00000356861 TNFAIP8O95379 198 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 STAU1O95793 577 aaKnown RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 OR56A5P0C7T3 313 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 RRM2P31350 389 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 HIRAP54198 1017 aaPredicted RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 PACS1Q6VY07 963 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 RMND5BQ96G75 393 aaPredicted RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 STN1Q9H668 368 aaKnown RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 GIT1Q9Y2X7 761 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 TNPO3Q9Y5L0 923 aaKnown RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 CLOCKO15516 846 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 MTA2O94776 668 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 PIK3CGP48736 1102 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 MRPS15P82914 257 aaKnown RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 QPCTQ16769 361 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 FAM45BPQ6NSW5 357 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 NKAPQ8N5F7 415 aaKnown RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 PCDH20Q8N6Y1 951 aaKnown RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 C1orf127Q8N9H9 656 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 FAM45AQ8TCE6 357 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 HMX1Q9NP08 348 aaPredicted RBP18.33■□□□□ 0.53
TNPO2-201ENST00000356861 SYBUQ9NX95 663 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 FBXO5Q9UKT4 447 aa18.33■□□□□ 0.53
TNPO2-201ENST00000356861 LTN1O94822 1766 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 RNASEH1O60930 286 aaKnown RBP18.33■□□□□ 0.52
TNPO2-201ENST00000356861 LRPAP1P30533 357 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 RAB10P61026 200 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 STARD3Q14849 445 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 SIX2Q9NPC8 291 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 FAM105AQ9NUU6 356 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 SMNDC1O75940 238 aaKnown RBP eCLIP18.33■□□□□ 0.521e-7■■■■□ 24.4
TNPO2-201ENST00000356861 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
TNPO2-201ENST00000356861 PLD1Q13393 1074 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 NET1Q7Z628 596 aaPredicted RBP18.33■□□□□ 0.52
TNPO2-201ENST00000356861 C12orf50Q8NA57 414 aaPredicted RBP18.33■□□□□ 0.52
TNPO2-201ENST00000356861 ABHD8Q96I13 439 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 C2orf49Q9BVC5 232 aaPredicted RBP18.33■□□□□ 0.52
TNPO2-201ENST00000356861 SNX15Q9NRS6 342 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 RAP2CQ9Y3L5 183 aa18.33■□□□□ 0.52
TNPO2-201ENST00000356861 SMIM35A0A1B0GVV1 85 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 BUD23O43709 281 aaKnown RBP18.32■□□□□ 0.52
TNPO2-201ENST00000356861 ENTPD5O75356 428 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 VCLP18206 1134 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 TFEBP19484 476 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 ARMC6Q6NXE6 501 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 ZSCAN18Q8TBC5 510 aaPredicted RBP18.32■□□□□ 0.52
TNPO2-201ENST00000356861 KCTD4Q8WVF5 259 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 CSPG4P5Q96PW8 444 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 SEMA3CQ99985 751 aa18.32■□□□□ 0.52
TNPO2-201ENST00000356861 NTPCRQ9BSD7 190 aaKnown RBP18.32■□□□□ 0.52
TNPO2-201ENST00000356861 TMEM109Q9BVC6 243 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms