RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 HIST3H2AQ7L7L0 130 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 PAGE2Q7Z2X7 111 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 OR52L1Q8NGH7 329 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 HIST1H2ACQ93077 130 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 EMILIN2Q9BXX0 1053 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 RHBGQ9H310 441 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 VPS28Q9UK41 221 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 CNTNAP5Q8WYK1 1306 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 STX16-NPEPL1H3BU86 382 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 CYB561D2O14569 222 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 STX16O14662 325 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 MSH4O15457 936 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 MEA1Q16626 185 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 RACGAP1Q9H0H5 632 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 PCDH9Q9HC56 1237 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 ABCB9Q9NP78 766 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 CAMTA2O94983 1202 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 VDRP11473 427 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 COX4I1P13073 169 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 SULT1C3Q6IMI6 304 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 TFAP2DQ7Z6R9 452 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 ALYREFQ86V81 257 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 TUBA8Q9NY65 449 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 WWP2O00308 870 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 RLN1P04808 185 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 NFKB1P19838 968 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 PRKAA2P54646 552 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 NR1H2P55055 460 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 RIPK1Q13546 671 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 HYIQ5T013 277 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 EGFLAMQ63HQ2 1017 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 GCNT7Q6ZNI0 430 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 CCDC36Q8IYA8 594 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 DAW1Q8N136 415 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 OR8H1Q8NGG4 311 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 AP3S1Q92572 193 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 KCNK4Q9NYG8 393 aa11.18□□□□□ -0.62
GTF3C1-201ENST00000356183 TBX3O15119 743 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PTPN1P18031 435 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 TYMPP19971 482 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 CYP4F8P98187 520 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 BIKQ13323 160 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RNF43Q68DV7 783 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PRR5LQ6MZQ0 368 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 DET1Q7L5Y6 550 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 SPACA7Q96KW9 195 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ERGIC3Q9Y282 383 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 LRRC14BA6NHZ5 514 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ENTPD5O75356 428 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 FARP2O94887 1054 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ALOX5P09917 674 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ATP5F1P24539 256 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ADRA1DP25100 572 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 HOXD10P28358 340 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 SEPHS1P49903 392 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 GRB10Q13322 594 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RUNDC3AQ59EK9 446 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 AADACL2Q6P093 401 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 G3V2T6 193 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 WFS1O76024 890 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PIGNO95427 931 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 MMP10P09238 476 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ACADLP28330 430 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 OCLNQ16625 522 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RD3Q7Z3Z2 195 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ULK2Q8IYT8 1036 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 MAGEB16A2A368 324 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PROSCO94903 275 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 C6orf222P0C671 652 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 TCF7P36402 384 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PNPLA4P41247 253 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 MTX3Q5HYI7 312 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF470Q6ECI4 717 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 CXXC5Q7LFL8 322 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 LEMD2Q8NC56 503 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 NDOR1Q9UHB4 597 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 CROCC2H7BZ55 1655 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 NR3C2P08235 984 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ABCG1P45844 678 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RPL14P50914 215 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PAN2Q504Q3 1202 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ESRP1Q6NXG1 681 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 SPESP1Q6UW49 350 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 GALNT5Q7Z7M9 940 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms