RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SMAPO00193 183 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 POLBP06746 335 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 PRKCHP24723 683 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 AIF1P55008 147 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 PIGWQ7Z7B1 504 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 DENND6AQ8IWF6 608 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 TNS4Q8IZW8 715 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 SMG5Q9UPR3 1016 aaKnown RBP17.94■□□□□ 0.46
NPAS3-202ENST00000356141 FAM159BA6NKW6 160 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 PRPF4O43172 522 aaKnown RBP eCLIP17.94■□□□□ 0.46
NPAS3-202ENST00000356141 BMP1P13497 986 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 PGAM1P18669 254 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 CORO7P57737 925 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 IRF9Q00978 393 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 CES4AQ5XG92 561 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 PACS1Q6VY07 963 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 OTOAQ7RTW8 1153 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 KIF2BQ8N4N8 673 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 ANKS4BQ8N8V4 417 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 RFWD2Q8NHY2 731 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 SPPL2BQ8TCT7 592 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 AGR3Q8TD06 166 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 CERS2Q96G23 380 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 SLC39A13Q96H72 371 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 YME1L1Q96TA2 773 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 MRPL9Q9BYD2 267 aaKnown RBP17.94■□□□□ 0.46
NPAS3-202ENST00000356141 PLK2Q9NYY3 685 aa17.94■□□□□ 0.46
NPAS3-202ENST00000356141 USP15Q9Y4E8 981 aaPredicted RBP17.94■□□□□ 0.46
NPAS3-202ENST00000356141 UBOX5O94941 541 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 VAPBO95292 243 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 RAG1P15918 1043 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 HCAR3P49019 387 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 NR1H3Q13133 447 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 MANEALQ5VSG8 457 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 ESRP1Q6NXG1 681 aaKnown RBP17.93■□□□□ 0.46
NPAS3-202ENST00000356141 C6orf89Q6UWU4 347 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 ZYG11BQ9C0D3 744 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 SMG9Q9H0W8 520 aaKnown RBP17.93■□□□□ 0.46
NPAS3-202ENST00000356141 COCHO43405 550 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 ALDOAP04075 364 aaKnown RBP17.93■□□□□ 0.46
NPAS3-202ENST00000356141 TWF1Q12792 350 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 SWT1Q5T5J6 900 aaKnown RBP17.93■□□□□ 0.46
NPAS3-202ENST00000356141 LINGO4Q6UY18 593 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 APOPT1Q96IL0 206 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 GLOD4Q9HC38 313 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 MOCS1Q9NZB8 636 aa17.93■□□□□ 0.46
NPAS3-202ENST00000356141 NYNRINQ9P2P1 1898 aaKnown RBP17.93■□□□□ 0.46
NPAS3-202ENST00000356141 DNAH14Q0VDD8 3507 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 RPL10AP62906 217 aaKnown RBP17.92■□□□□ 0.46
NPAS3-202ENST00000356141 ANKRD20A4Q4UJ75 823 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 FAM219BQ5XKK7 198 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 IL31Q6EBC2 164 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 ITPRIPL1Q6GPH6 555 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 SUGP1Q8IWZ8 645 aaKnown RBP17.92■□□□□ 0.46
NPAS3-202ENST00000356141 KCTD3Q9Y597 815 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 ACTL7BQ9Y614 415 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 ZFP37Q9Y6Q3 630 aaPredicted RBP17.92■□□□□ 0.46
NPAS3-202ENST00000356141 KRT38O76015 456 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 KLKB1P03952 638 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 CLTBP09497 229 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 GLRBP48167 497 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 MPP1Q00013 466 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 PRPSAP1Q14558 356 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 CNGA3Q16281 694 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 TXNDC8Q6A555 127 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.92■□□□□ 0.46
NPAS3-202ENST00000356141 APBB2Q92870 758 aa17.92■□□□□ 0.46
NPAS3-202ENST00000356141 CPSF2Q9P2I0 782 aaKnown RBP17.92■□□□□ 0.46
NPAS3-202ENST00000356141 MTO1Q9Y2Z2 717 aaKnown RBP17.92■□□□□ 0.46
NPAS3-202ENST00000356141 OR51F1A6NGY5 319 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 NRG2O14511 850 aaPredicted RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 AURKAO14965 403 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 NCAM2O15394 837 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 PHGDHO43175 533 aaKnown RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 NIPAL4Q0D2K0 466 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 POLD3Q15054 466 aaPredicted RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 PDK4Q16654 411 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 KCTD11Q693B1 232 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 ANKRD33Q7Z3H0 272 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 FITM2Q8N6M3 262 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 ATP6V0D2Q8N8Y2 350 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 TBL1YQ9BQ87 522 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 MANSC1Q9H8J5 431 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 TBX21Q9UL17 535 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 MTF2Q9Y483 593 aaPredicted RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 FNDC1Q4ZHG4 1894 aaPredicted RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 H7C4K7 107 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 MUSKO15146 869 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 MATN3O15232 486 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 TBC1D4O60343 1298 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 LYPLA1O75608 230 aaPredicted RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 ITGA2BP08514 1039 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 TYK2P29597 1187 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 CYP4F8P98187 520 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 GALNT3Q14435 633 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 TRPM8Q7Z2W7 1104 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 KCNMB4Q86W47 210 aa17.91■□□□□ 0.46
NPAS3-202ENST00000356141 PLD6Q8N2A8 252 aaKnown RBP17.91■□□□□ 0.46
NPAS3-202ENST00000356141 ZCWPW2A0A1B0GU75 182 aa17.9■□□□□ 0.46
NPAS3-202ENST00000356141 CCT8L1PA6NM43 557 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms