RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 GRID2IPA4D2P6 1211 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 FITM1A5D6W6 292 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CDX4O14627 284 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 RECQL4O94761 1208 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 URI1O94763 535 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 B3GAT3O94766 335 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 SEC24AO95486 1093 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CAPNS1P04632 268 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CYP1A2P05177 515 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CALB1P05937 261 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 MYL4P12829 197 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 UNGP13051 313 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 KRT5P13647 590 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 IGFBP6P24592 240 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 LRPAP1P30533 357 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 MAN1A1P33908 653 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 SLC1A1P43005 524 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 NSFP46459 744 aaKnown RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 MYL6P60660 151 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 TEKQ02763 1124 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 NR0B2Q15466 257 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 TEAD2Q15562 447 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CLEC16AQ2KHT3 1053 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 COL28A1Q2UY09 1125 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 JADE1Q6IE81 842 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 ACAD10Q6JQN1 1059 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 C19orf48Q6RUI8 117 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 TMEM270Q6UE05 265 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 DPH6Q7L8W6 267 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 SLC47A2Q86VL8 602 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CAMKK1Q8N5S9 505 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 RBBP8NLQ8NC74 664 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 TTC8Q8TAM2 541 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CCDC74BQ96LY2 380 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 BBC3Q96PG8 261 aaPredicted RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 RSRP1Q9BUV0 290 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 ASPNQ9BXN1 380 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CXCL16Q9H2A7 254 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 LHX5Q9H2C1 402 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 MRPL47Q9HD33 250 aaKnown RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 CISHQ9NSE2 258 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 GDAP2Q9NXN4 497 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 DPP3Q9NY33 737 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 SNTG2Q9NY99 539 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 GTSE1Q9NYZ3 720 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 STRIP2Q9ULQ0 834 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 SNX12Q9UMY4 172 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 NUB1Q9Y5A7 615 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 SCINQ9Y6U3 715 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 VWA8A3KMH1 1905 aa7.26□□□□□ -1.25
VPS13A-201ENST00000355766 HELZ2Q9BYK8 2649 aaKnown RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 UQCRHLA0A096LP55 91 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CTAGE15A4D2H0 777 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 FAM221BA6H8Z2 402 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 I3L4J1 428 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 DCLK1O15075 740 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 MEFVO15553 781 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TRAPPC3O43617 180 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 ATG13O75143 517 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TADA3O75528 432 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 ITGB3P05106 788 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 UQCRHP07919 91 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CTAGE8P0CG41 777 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 SETSIPP0DME0 302 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CHRNB2P17787 502 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 RPL9P32969 192 aaKnown RBP7.25□□□□□ -1.25
VPS13A-201ENST00000355766 USP8P40818 1118 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 BRCC3P46736 316 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CLCNKBP51801 687 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 GALCP54803 685 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 SNX16P57768 344 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TNNC1P63316 161 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TWF1Q12792 350 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 PPP2R5EQ16537 467 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TPGS2Q68CL5 300 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 PMS2CLQ68D20 193 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CD300LGQ6UXG3 332 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 LIMS2Q7Z4I7 341 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 MTERF4Q7Z6M4 381 aaKnown RBP7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CTAGE6Q86UF2 777 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TMC8Q8IU68 726 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CTAGE4Q8IX94 777 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 GOLM1Q8NBJ4 401 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TMEM35BQ8NCS4 154 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 FBXO27Q8NI29 283 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 KAT5Q92993 513 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 HPDLQ96IR7 371 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 ZFYVE19Q96K21 471 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 ZNF512Q96ME7 567 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-201ENST00000355766 UROC1Q96N76 676 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 TMEM209Q96SK2 561 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 NAP1L3Q99457 506 aaPredicted RBP7.25□□□□□ -1.25
VPS13A-201ENST00000355766 PI4K2AQ9BTU6 479 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 SLC6A17Q9H1V8 727 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 CARD9Q9H257 536 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 SLC32A1Q9H598 525 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 OBP2AQ9NY56 170 aa7.25□□□□□ -1.25
VPS13A-201ENST00000355766 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms