RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ZNF599Q96NL3 588 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 C17orf80Q9BSJ5 609 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 SYBUQ9NX95 663 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 ZNF180Q9UJW8 692 aa23.27■■□□□ 1.32
SCAMP3-202ENST00000355379 A0A1B0GVM2 712 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 TCAF2A6NFQ2 919 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 PRAMEF11O60813 436 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 SLC7A9P82251 487 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 CDH17Q12864 832 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 FRG1Q14331 258 aaKnown RBP23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 SPANXN3Q5MJ09 141 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 PPM1LQ5SGD2 360 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 TXNDC8Q6A555 127 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 CASC4Q6P4E1 433 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 ARL14EPQ8N8R7 260 aaPredicted RBP23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 ADAMTS19Q8TE59 1207 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 TTC17Q96AE7 1141 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 SAMD11Q96NU1 681 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 GCNAQ96QF7 691 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 SLC22A12Q96S37 553 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 CYP2S1Q96SQ9 504 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 IKBKGQ9Y6K9 419 aa23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 HELZP42694 1942 aaKnown RBP23.26■■□□□ 1.31
SCAMP3-202ENST00000355379 GBF1Q92538 1859 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 FGF19O95750 216 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 INHBAP08476 426 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 BRAFP15056 766 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 CHN1P15882 459 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 KRT15P19012 456 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 LSP1P33241 339 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 ACVRL1P37023 503 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 GNA12Q03113 381 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 MPP3Q13368 585 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 Q6ZNB5 142 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 SETD3Q86TU7 594 aaPredicted RBP23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 SLC26A11Q86WA9 606 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 LRRC6Q86X45 466 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 CCDC117Q8IWD4 279 aaPredicted RBP23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 SRRM1Q8IYB3 904 aaKnown RBP23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 CNPY4Q8N129 248 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 DNAAF3Q8N9W5 541 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 TBL1YQ9BQ87 522 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 IL22Q9GZX6 179 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 PDFQ9HBH1 243 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 SMPD4Q9NXE4 827 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 SAMD15Q9P1V8 674 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 ZNF510Q9Y2H8 683 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 CPQQ9Y646 472 aa23.25■■□□□ 1.31
SCAMP3-202ENST00000355379 IQANK1A0A1B0GTG1 560 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 ILVBLA1L0T0 632 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 GREM1O60565 184 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 POLBP06746 335 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 RPS24P62847 133 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 NAB1Q13506 487 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 OLIG2Q13516 323 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 TTC19Q6DKK2 380 aaPredicted RBP23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 PDE12Q6L8Q7 609 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 ZNF354CQ86Y25 554 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 FAM217AQ8IXS0 508 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 SPATA22Q8NHS9 363 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 MDM1Q8TC05 714 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 MZB1Q8WU39 189 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 MRRFQ96E11 262 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 IMP4Q96G21 291 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 TRABDQ9H4I3 376 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 SSU72Q9NP77 194 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 ASAH2Q9NR71 780 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 TBC1D30Q9Y2I9 924 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 MIA3Q5JRA6 1907 aa23.24■■□□□ 1.31
SCAMP3-202ENST00000355379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 TRAV19A0A0A6YYK7 116 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 GFRA2O00451 464 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 USP12O75317 370 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 CREB1P16220 341 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 HOXA9P31269 272 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 ADRA1AP35348 466 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 SLC18A1P54219 525 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 EPHA5P54756 1037 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 CYP4F8P98187 520 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 SLC10A7Q0GE19 358 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 ZNF177Q13360 481 aaPredicted RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 LBRQ14739 615 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 CRYMQ14894 314 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 TMCO4Q5TGY1 634 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 ARMC3Q5W041 872 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 ZNF783Q6ZMS7 281 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 PABPC5Q96DU9 382 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 ATXN3LQ9H3M9 355 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 NT5MQ9NPB1 228 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 VPS45Q9NRW7 570 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 INTS9Q9NV88 658 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 UBP1Q9NZI7 540 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 LSM7Q9UK45 103 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 TMEM120BA0PK00 339 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 KDELR3O43731 214 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 CRADDP78560 199 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 KDELC1Q6UW63 502 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 HTR3DQ70Z44 454 aa23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 MARK2Q7KZI7 788 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-202ENST00000355379 TMEM135Q86UB9 458 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms