RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 GBP6Q6ZN66 633 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 RUFY4Q6ZNE9 571 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 MAP4K3Q8IVH8 894 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 NUP93Q8N1F7 819 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 HSPBAP1Q96EW2 488 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 CALML4Q96GE6 196 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 MTA3Q9BTC8 594 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 DHRS4Q9BTZ2 278 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 CALN1Q9BXU9 219 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 RBM38Q9H0Z9 239 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 SH3GLB2Q9NR46 395 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 RNF146Q9NTX7 359 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 TBC1D30Q9Y2I9 924 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 USP3Q9Y6I4 520 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 AREL1O15033 823 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 OGTO15294 1046 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 LILRB3O75022 631 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 RNASEH2AO75792 299 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 EFNA1P20827 205 aaPredicted RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 TGM4P49221 684 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 GATMP50440 423 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 YWHAZP63104 245 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 MYBPC1Q00872 1141 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 SLC14A1Q13336 389 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 NRF1Q16656 503 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 ODF2Q5BJF6 829 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 CLEC4FQ8N1N0 589 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 C3orf20Q8ND61 904 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 ZFP28Q8NHY6 868 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 DLG3Q92796 817 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 KLHL29Q96CT2 875 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 SLC22A12Q96S37 553 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 RTP3Q9BQQ7 232 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 METTL14Q9HCE5 456 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 COL6A5A8TX70 2615 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 GRXCR2A6NFK2 248 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 SPATA31C2B4DYI2 1134 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 ITGB3P05106 788 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 TNFAIP3P21580 790 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 GKP32189 559 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 KRT83P78385 493 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 TCF15Q12870 199 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 FSCN1Q16658 493 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 SCYL1Q96KG9 808 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 SEMA6AQ9H2E6 1030 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 EPHX3Q9H6B9 360 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 ACAD9Q9H845 621 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 SLC27A5Q9Y2P5 690 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 PLXNB3Q9ULL4 1909 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 M0R129 80 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 FBP2O00757 339 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 SPOPO43791 374 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 CYP2C18P33260 490 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 CASP9P55211 416 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ZNF697Q5TEC3 545 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 SNX30Q5VWJ9 437 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 HMBOX1Q6NT76 420 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 TXNDC11Q6PKC3 985 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 Q6ZPB1 254 aaPredicted RBP5.76□□□□□ -1.49
CD47-201ENST00000355354 RNF207Q6ZRF8 634 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ELMO1Q92556 727 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 EXOC2Q96KP1 924 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 SLC9A7Q96T83 725 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ACOX2Q99424 681 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 PAFAH2Q99487 392 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 LRFN3Q9BTN0 628 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 TRAIPQ9BWF2 469 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.76□□□□□ -1.49
CD47-201ENST00000355354 C2CD2Q9Y426 696 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 MAST4O15021 2626 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ASPDHA6ND91 283 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 E9PBE3 544 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 YY2O15391 372 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 KLHL41O60662 606 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 GJB5O95377 273 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 NCKAP1LP55160 1127 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 SESN2P58004 480 aaPredicted RBP5.76□□□□□ -1.49
CD47-201ENST00000355354 TPM4P67936 248 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 PPIGQ13427 754 aaKnown RBP eCLIP5.76□□□□□ -1.49
CD47-201ENST00000355354 PPP2R5DQ14738 602 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 DENND5AQ6IQ26 1287 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 UNC5AQ6ZN44 842 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 INTS8Q75QN2 995 aaKnown RBP5.76□□□□□ -1.49
CD47-201ENST00000355354 NLRP9Q7RTR0 991 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 HERC6Q8IVU3 1022 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 KCNN1Q92952 543 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 TOP1MTQ969P6 601 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 IMPG2Q9BZV3 1241 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ZC3H7BQ9UGR2 993 aaKnown RBP5.76□□□□□ -1.49
CD47-201ENST00000355354 ZDHHC2Q9UIJ5 367 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 CLEC4EQ9ULY5 219 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 KRBA1A5PL33 1030 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 LACTBL1A8MY62 500 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 TARM1B6A8C7 271 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ATP8B1O43520 1251 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 TNNI1P19237 187 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 L1CAMP32004 1257 aa5.76□□□□□ -1.49
CD47-201ENST00000355354 ZFP36L2P47974 494 aaKnown RBP5.76□□□□□ -1.49
CD47-201ENST00000355354 MRPL12P52815 198 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms