RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 E2F7Q96AV8 911 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 EME1Q96AY2 570 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 C18orf25Q96B23 403 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 TAMM41Q96BW9 452 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 AGAP3Q96P47 875 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 SH3GL1Q99961 368 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 GPAMQ9HCL2 828 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 GID8Q9NWU2 228 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 TIMM22Q9Y584 194 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 OTOFQ9HC10 1997 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 SLC15A5A6NIM6 579 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CXCL11O14625 94 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CHADO15335 359 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PAPSS1O43252 624 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 GAS2O43903 313 aaKnown RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 HSPA8P11142 646 aaKnown RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 ADORA2AP29274 412 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 RBP5P82980 135 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 SLC10A2Q12908 348 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 FOXD4Q12950 439 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 GPR141Q7Z602 305 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 MYO1HQ8N1T3 1032 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 ZNF786Q8N393 782 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 SYT17Q9BSW7 474 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 HAUS8Q9BT25 410 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 FRMD8P1Q9BZ68 369 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 SSU72Q9NP77 194 aaKnown RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 SNTG2Q9NY99 539 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 RBPJLQ9UBG7 517 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PLA2G4CQ9UP65 541 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CARD8Q9Y2G2 431 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 LGALS2P05162 132 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CYP2C8P10632 490 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 GTF2A2P52657 109 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 RPL10AP62906 217 aaKnown RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 MRPS5P82675 430 aaKnown RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 SNAPC2Q13487 334 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 OLIG2Q13516 323 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PGS1Q32NB8 556 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 VWA5B1Q5TIE3 1220 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PPP2R2DQ66LE6 453 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 ZNF398Q8TD17 642 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 LGMNQ99538 433 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 C20orf27Q9GZN8 174 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 PLAC1Q9HBJ0 212 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 GBA2Q9HCG7 927 aaPredicted RBP9.55□□□□□ -0.88
SMG6-202ENST00000354901 KLK14Q9P0G3 267 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 CDH22Q9UJ99 828 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 ST14Q9Y5Y6 855 aa9.55□□□□□ -0.88
SMG6-202ENST00000354901 ARHGEF37A1IGU5 675 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 WDR27A2RRH5 827 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CNMDO75829 334 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 PTPRFP10586 1907 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
SMG6-202ENST00000354901 ABCG1P45844 678 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 GABRB2P47870 512 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 TPTEP56180 551 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 SLC18A2Q05940 514 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 KCNJ8Q15842 424 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 RGS21Q2M5E4 152 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 EML3Q32P44 896 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 BOLA3Q53S33 107 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 LGSNQ5TDP6 509 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 LCLAT1Q6UWP7 414 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CCNYQ8ND76 341 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 C12orf43Q96C57 262 aaKnown RBP9.54□□□□□ -0.88
SMG6-202ENST00000354901 TMEM79Q9BSE2 394 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 NRDE2Q9H7Z3 1164 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 MARCH7Q9H992 704 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 DKK3Q9UBP4 350 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 FETUBQ9UGM5 382 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CROCCQ5TZA2 2017 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 RFPL1O75677 317 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 GABBR2O75899 941 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 DHRS4L1P0CG22 281 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 MCF2P10911 925 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 AKAP5P24588 427 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 NDST2P52849 883 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 RABGGTBP53611 331 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 TNFAIP2Q03169 654 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 HEATR6Q6AI08 1181 aaKnown RBP9.54□□□□□ -0.88
SMG6-202ENST00000354901 NANOGP8Q6NSW7 305 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CCDC185Q8N715 623 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 FAM156AQ8NDB6 213 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CYP3A43Q9HB55 503 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 MAN1C1Q9NR34 630 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 ITGB1BP2Q9UKP3 347 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 AP4E1Q9UPM8 1137 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 PLLPQ9Y342 182 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 BTBD19C9JJ37 291 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CHEK2O96017 543 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 GOT1P17174 413 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 SLC6A3Q01959 620 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 RALGDSQ12967 914 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 FLOT2Q14254 428 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 NEDD8Q15843 81 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 C9orf131Q5VYM1 1079 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms