RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 ZNF555Q8NEP9 628 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 ADNPQ9H2P0 1102 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 EFCAB1Q9HAE3 211 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TEKT2Q9UIF3 430 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TPP1O14773 563 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 KRT6AP02538 564 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 KRT6BP04259 564 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 LMO2P25791 158 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 KRT6CP48668 564 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 PATL1Q86TB9 770 aaKnown RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 BTN2A3PQ96KV6 586 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 DMAC2Q9NW81 257 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 ZMYND8Q9ULU4 1186 aaPredicted RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 F8W810 466 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 SYN3O14994 580 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 CTPS1P17812 591 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TKTP29401 623 aaKnown RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 CYLC2Q14093 348 aaPredicted RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 CYTH1Q15438 398 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TRIP10Q15642 601 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 GDF6Q6KF10 455 aaPredicted RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TMEM192Q8IY95 271 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 CASP10Q92851 521 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TYMPP19971 482 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 SPIRE1Q08AE8 756 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 NFYCQ13952 458 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 UNC5AQ6ZN44 842 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 GET4Q7L5D6 327 aaPredicted RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 TFAP2BQ92481 460 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 PTPRHQ9HD43 1115 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 MYBPHLA2RUH7 354 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 CORO1AP31146 461 aaKnown RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 THOP1P52888 689 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 RABGGTBP53611 331 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 JAM2P57087 298 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 ZCCHC23Q6ZST2 131 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 SRLQ86TD4 932 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 GALNT4Q8N4A0 578 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 PIK3R5Q8WYR1 880 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 SMG7Q92540 1137 aaKnown RBP15.12■□□□□ 0.01
COL17A1-201ENST00000353479 CERS2Q96G23 380 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 PWWP2AQ96N64 755 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 NEUROG2Q9H2A3 272 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 MORF4L1Q9UBU8 362 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 PCDHGC3Q9UN70 934 aa15.12■□□□□ 0.01
COL17A1-201ENST00000353479 C1orf232A0A0U1RR37 186 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 C1QTNF3-AMACRE9PGA6 284 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ILF2Q12905 390 aaKnown RBP15.11■□□□□ 0.01
COL17A1-201ENST00000353479 PRKAA1Q13131 559 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ITIH4Q14624 930 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 TCEA2Q15560 299 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 FBXW10Q5XX13 1052 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ANKS6Q68DC2 871 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 PRSS55Q6UWB4 352 aaPredicted RBP15.11■□□□□ 0.01
COL17A1-201ENST00000353479 MIER2Q8N344 545 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 OSBPL1AQ9BXW6 950 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 POMKQ9H5K3 350 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ZMYM5Q9UJ78 669 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 UBDO15205 165 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ZBTB14O43829 449 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 NCALDP61601 193 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 RASA2Q15283 850 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 CRY1Q16526 586 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 CYP51A1Q16850 503 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ATP6AP1LQ52LC2 224 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 C16orf46Q6P387 395 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 SLC41A1Q8IVJ1 513 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 OR6K2Q8NGY2 324 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 P2RY11Q96G91 374 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 WDR41Q9HAD4 459 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ZNF510Q9Y2H8 683 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ARVCFO00192 962 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 BAIAP3O94812 1187 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 CYP1A1P04798 512 aaPredicted RBP15.11■□□□□ 0.01
COL17A1-201ENST00000353479 CDH2P19022 906 aaPredicted RBP15.11■□□□□ 0.01
COL17A1-201ENST00000353479 IL2P60568 153 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 TLE2Q04725 743 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 XRCC4Q13426 336 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 TPST1O60507 370 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 ZNF792Q3KQV3 632 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 CHPFQ8IZ52 775 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 FAM9CQ8IZT9 166 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 CYGBQ8WWM9 190 aa15.11■□□□□ 0.01
COL17A1-201ENST00000353479 HNRNPABQ99729 332 aaKnown RBP15.11■□□□□ 0.01
COL17A1-201ENST00000353479 A0A087X1B8 175 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 DMC1Q14565 340 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 INSCQ1MX18 579 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 RAET1GQ6H3X3 334 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 RGL4Q8IZJ4 473 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 OR9Q1Q8NGQ5 310 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 CNDP1Q96KN2 507 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 CATSPER2Q96P56 530 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 CSPG4P5Q96PW8 444 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 ADH1CP00326 375 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 HSPA14Q0VDF9 509 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 FAM228AQ86W67 206 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 ARL15Q9NXU5 204 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 COG5Q9UP83 839 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms