RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SEL1L3Q68CR1 1132 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 SLC41A1Q8IVJ1 513 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 RGL4Q8IZJ4 473 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 OR7D4Q8NG98 312 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 TEKT4Q8WW24 435 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 EMID1Q96A84 441 aaPredicted RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 OTULINQ96BN8 352 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 TSPAN18Q96SJ8 248 aa13.92□□□□□ -0.18
SMC6-201ENST00000351948 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
SMC6-201ENST00000351948 CCT8L1PA6NM43 557 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 ZSCAN9O15535 394 aaPredicted RBP13.91□□□□□ -0.18
SMC6-201ENST00000351948 KLHL2O95198 593 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 LMNAP02545 664 aaKnown RBP13.91□□□□□ -0.18
SMC6-201ENST00000351948 VCLP18206 1134 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 AP2B1P63010 937 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 PCID2Q5JVF3 399 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 GRTP1Q5TC63 336 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 FBXW10Q5XX13 1052 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
SMC6-201ENST00000351948 PLD5Q8N7P1 536 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CMTM5Q96DZ9 223 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 MAGEB18Q96M61 343 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 ING2Q9H160 280 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 HAO1Q9UJM8 370 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CPQQ9Y646 472 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 PLCH1Q4KWH8 1693 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 E9PAM4 449 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 TPBGLP0DKB5 382 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 PEX19P40855 299 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 SERPINB4P48594 390 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 BRMS1LQ5PSV4 323 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 SYPL2Q5VXT5 272 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CPNE1Q99829 537 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 PIF1Q9H611 641 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 STOML1Q9UBI4 398 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 COQ4Q9Y3A0 265 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 PTPRJQ12913 1337 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 SYCE1LA8MT33 242 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CYP1A1P04798 512 aaPredicted RBP13.91□□□□□ -0.18
SMC6-201ENST00000351948 MAGEA9P43362 315 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 TMEM130Q8N3G9 435 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 THUMPD3Q9BV44 507 aaKnown RBP13.91□□□□□ -0.18
SMC6-201ENST00000351948 ELOVL6Q9H5J4 265 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 BTAF1O14981 1849 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 GNG14A0A1W2PPG7 69 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CCL22O00626 93 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CNTFP26441 200 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 DAOAP59103 153 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CA9Q16790 459 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 RRM2BQ7LG56 351 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 PCYOX1LQ8NBM8 494 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 CERS2Q96G23 380 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 ALG9Q9H6U8 611 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 ATP13A3Q9H7F0 1226 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 BRD9Q9H8M2 597 aa13.91□□□□□ -0.18
SMC6-201ENST00000351948 TRPC5OSA6NMA1 111 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 SYN3O14994 580 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 PAX3P23760 479 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 GPR15P49685 360 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 CNGA3Q16281 694 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 DUPD1Q68J44 220 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 CCDC90BQ9GZT6 254 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 AKAP10O43572 662 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 SEC24DO94855 1032 aaPredicted RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 GNRH1P01148 92 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 TSPAN8P19075 237 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 WARSP23381 471 aaKnown RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 FPGSQ05932 587 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 NR6A1Q15406 480 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 KREMEN2Q8NCW0 462 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 RPL10LQ96L21 214 aaKnown RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 TMEM120AQ9BXJ8 343 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 TNKS2Q9H2K2 1166 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 Q9Y3F1 56 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 MYO1GB0I1T2 1018 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 INPP4BO15327 924 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 STBD1O95210 358 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 CYP2A6P11509 494 aaPredicted RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 GPD2P43304 727 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 CDK18Q07002 472 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 CLEC20AQ6ZU45 233 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 SPATA22Q8NHS9 363 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 HDAC10Q969S8 669 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 GKN1Q9NS71 199 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 C2CD4BA6NLJ0 364 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 TACR2P21452 398 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 RPA3P35244 121 aaPredicted RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 CDKN2BP42772 138 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 CCNG1P51959 295 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 SFSWAPQ12872 951 aaKnown RBP13.9□□□□□ -0.18
SMC6-201ENST00000351948 CDC16Q13042 620 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 RAET1GQ6H3X3 334 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 TAS1R3Q7RTX0 852 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 MIR1-1HGQ9H1L0 117 aa13.9□□□□□ -0.18
SMC6-201ENST00000351948 A0A1W2PRU2 124 aa13.89□□□□□ -0.19
SMC6-201ENST00000351948 VGLL3A8MV65 326 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms