RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SRGAP2BP0DMP2 458 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 ABCG1P45844 678 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 RAB27AP51159 221 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 GNASQ5JWF2 1037 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 EPGNQ6UW88 154 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 CD300LGQ6UXG3 332 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 OTOP3Q7RTS5 596 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 ZNF781Q8N8C0 355 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 TRPV1Q8NER1 839 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 ACVR1CQ8NER5 493 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 FCRL5Q96RD9 977 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 OXCT2Q9BYC2 517 aaPredicted RBP22.51■■□□□ 1.19
UPF3A-201ENST00000351487 MAGED2Q9UNF1 606 aaPredicted RBP22.51■■□□□ 1.19
UPF3A-201ENST00000351487 MYLKQ15746 1914 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 MEI4A8MW99 385 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 HSPA4LO95757 839 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 GRM3Q14832 879 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 ZRSR2Q15696 482 aaKnown RBP22.51■■□□□ 1.19
UPF3A-201ENST00000351487 VWA5B1Q5TIE3 1220 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 MANEALQ5VSG8 457 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 CXCL17Q6UXB2 119 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 CCDC117Q8IWD4 279 aaPredicted RBP22.51■■□□□ 1.19
UPF3A-201ENST00000351487 CNTN4Q8IWV2 1026 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 SCG3Q8WXD2 468 aaKnown RBP22.51■■□□□ 1.19
UPF3A-201ENST00000351487 FAM167BQ9BTA0 163 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 C1QTNF1Q9BXJ1 281 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 OXSMQ9NWU1 459 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 LRCH1Q9Y2L9 728 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 WASF2Q9Y6W5 498 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 FGF10O15520 208 aaPredicted RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 PAX3P23760 479 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 BRCC3P46736 316 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 MAPRE1Q15691 268 aaKnown RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 C1orf146Q5VVC0 180 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 RWDD4Q6NW29 188 aaKnown RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 ATPAF2Q8N5M1 289 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 LZTR1Q8N653 840 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 OR10T2Q8NGX3 314 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 FAM136AQ96C01 138 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 CMTM5Q96DZ9 223 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 IL12RB2Q99665 862 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 COG4Q9H9E3 785 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 CORO1CQ9ULV4 474 aaPredicted RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 NYNRINQ9P2P1 1898 aaKnown RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 DNAJB1P25685 340 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 PRDX6P30041 224 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 PCID2Q5JVF3 399 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 METTL21CQ5VZV1 264 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 PKN3Q6P5Z2 889 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 ARHGAP36Q6ZRI8 547 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 PPFIBP2Q8ND30 876 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 ZNF419Q96HQ0 510 aaPredicted RBP22.5■■□□□ 1.19
UPF3A-201ENST00000351487 TBL1YQ9BQ87 522 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 OSBPL1AQ9BXW6 950 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 SLC39A10Q9ULF5 831 aa22.5■■□□□ 1.19
UPF3A-201ENST00000351487 DFFAO00273 331 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ANXA9O76027 345 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 NUMBP49757 651 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 SLC25A3Q00325 362 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 BTKQ06187 659 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 GRIK3Q13003 919 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 USP4Q13107 963 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 PAN2Q504Q3 1202 aaKnown RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ARTNQ5T4W7 220 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ZYG11AQ6WRX3 759 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 LRRTM3Q86VH5 581 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 POU5F2Q8N7G0 328 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 USP33Q8TEY7 942 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 PPP1R2P1Q96PQ5 205 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 GATA5Q9BWX5 397 aaPredicted RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 SMOC2Q9H3U7 446 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 MYO16Q9Y6X6 1858 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 MANSC4A6NHS7 340 aaPredicted RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 MGEA5O60502 916 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 CCNT2O60583 730 aaKnown RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ANPEPP15144 967 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 PRKAA2P54646 552 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 MRPS35P82673 323 aaKnown RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 TMCO4Q5TGY1 634 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 TMEM151AQ8N4L1 468 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 SPATA22Q8NHS9 363 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 SCAMP5Q8TAC9 235 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 LBHD1Q9BQE6 289 aaPredicted RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ACE2Q9BYF1 805 aaPredicted RBP22.49■■□□□ 1.19
UPF3A-201ENST00000351487 CATSPERBQ9H7T0 1116 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 GLOD4Q9HC38 313 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ABCC13Q9NSE7 274 aa22.49■■□□□ 1.19
UPF3A-201ENST00000351487 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.48■■□□□ 1.19
UPF3A-201ENST00000351487 A6NHS1 94 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 MAFKO60675 156 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 POMCP01189 267 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 SKIP12755 728 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 HK2P52789 917 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 AP2B1P63010 937 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 UGP2Q16851 508 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 FSCBQ5H9T9 825 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 RASAL3Q86YV0 1011 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 ACTRT2Q8TDY3 377 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 PTCD2Q8WV60 388 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms