RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MCPH1Q8NEM0 835 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 MAGEB5Q9BZ81 275 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 MUC3BQ9H195 1237 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 TASP1Q9H6P5 420 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 MTMR10Q9NXD2 777 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 CCDC167Q9P0B6 97 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 CCNL1Q9UK58 526 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 PCDHA10Q9Y5I2 948 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 LOXHD1Q8IVV2 1947 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 DGAT1O75907 488 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 SLC7A1P30825 629 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 CDH5P33151 784 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 BFSP2Q13515 415 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 OLIG2Q13516 323 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 PDK2Q15119 407 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 DEPDC1Q5TB30 811 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 CDCA7Q9BWT1 371 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 SIAEQ9HAT2 523 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 PRDM16Q9HAZ2 1276 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 SYBUQ9NX95 663 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 SEPT10Q9P0V9 454 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 HESX1Q9UBX0 185 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 IPO11Q9UI26 975 aaKnown RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 CROTQ9UKG9 612 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 DGKBQ9Y6T7 804 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 TMEM114B3SHH9 223 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 KPNA4O00629 521 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 TADA2AO75478 443 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 SOX11P35716 441 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 NME5P56597 212 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 MERTKQ12866 999 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 HEATR6Q6AI08 1181 aaKnown RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 TRNP1Q6NT89 227 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 PPP4R4Q6NUP7 873 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 CYP4V2Q6ZWL3 525 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 CDKL3Q8IVW4 592 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 ZNF420Q8TAQ5 688 aaPredicted RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 TRUB1Q8WWH5 349 aaKnown RBP15.59■□□□□ 0.09
LMNA-201ENST00000347559 RTP4Q96DX8 246 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 TCF12Q99081 682 aa15.59■□□□□ 0.09
LMNA-201ENST00000347559 EDN1P05305 212 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 MATN1P21941 496 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 S100A1P23297 94 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 MLLT10P55197 1068 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 KRT76Q01546 638 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 EN1Q05925 392 aaPredicted RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 SLC27A3Q5K4L6 730 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 FSTL4Q6MZW2 842 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 ZDHHC15Q96MV8 337 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 AGAP2Q99490 1192 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 VPS33BQ9H267 617 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 SUCOQ9UBS9 1254 aaKnown RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 AP4E1Q9UPM8 1137 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 NRAPQ86VF7 1730 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 DYNC1LI2O43237 492 aaPredicted RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 CLASP2O75122 1294 aaKnown RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 CYP2C9P11712 490 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 EEF1DP29692 281 aaKnown RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 SFNP31947 248 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 MAGEA6P43360 314 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 HSD17B4P51659 736 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 ZNF143P52747 638 aaPredicted RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 KIZQ2M2Z5 673 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 PGS1Q32NB8 556 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 TBCELQ5QJ74 424 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 CADM3Q8N126 398 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 CNTD1Q8N815 330 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 CNPY3Q9BT09 278 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 UPF3AQ9H1J1 476 aaKnown RBP15.58■□□□□ 0.08
LMNA-201ENST00000347559 IL1RL2Q9HB29 575 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 POU2F3Q9UKI9 436 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 SLC27A5Q9Y2P5 690 aa15.58■□□□□ 0.08
LMNA-201ENST00000347559 SNAP91O60641 907 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 ALDH1A2O94788 518 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 ENDOD1O94919 500 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 ATG7O95352 703 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 C2P06681 752 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 TPSB2P20231 275 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 TGM2P21980 687 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 TGFB2P61812 414 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 TPSAB1Q15661 275 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 CARTPTQ16568 116 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 AGKQ53H12 422 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 SLFN12LQ6IEE8 588 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 DHFR2Q86XF0 187 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 PCYOX1LQ8NBM8 494 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 ACVR1CQ8NER5 493 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 NSMCE3Q96MG7 304 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 C1orf50Q9BV19 199 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 ACE2Q9BYF1 805 aaPredicted RBP15.57■□□□□ 0.08
LMNA-201ENST00000347559 NACA2Q9H009 215 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 CCDC78A2IDD5 438 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 PAPSS1O43252 624 aaPredicted RBP15.57■□□□□ 0.08
LMNA-201ENST00000347559 MED7O43513 233 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 TCEA1P23193 301 aaKnown RBP15.57■□□□□ 0.08
LMNA-201ENST00000347559 RGS7P49802 495 aa15.57■□□□□ 0.08
LMNA-201ENST00000347559 RPS3AP61247 264 aaKnown RBP15.57■□□□□ 0.08
LMNA-201ENST00000347559 PRKCEQ02156 737 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms