RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ZSWIM3Q96MP5 696 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 TTC25Q96NG3 672 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 ZNF599Q96NL3 588 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 MLPHQ9BV36 600 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 ROPN1BQ9BZX4 212 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 ROPN1Q9HAT0 212 aaPredicted RBP11.2□□□□□ -0.62
ECM1-201ENST00000346569 PDFQ9HBH1 243 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 TMBIM4Q9HC24 238 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 TDP1Q9NUW8 608 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 OR51B4Q9Y5P0 310 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 CHD5Q8TDI0 1954 aa11.2□□□□□ -0.62
ECM1-201ENST00000346569 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ERI2A8K979 691 aaKnown RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 PSMD3O43242 534 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 KDELR3O43731 214 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 TBL1XO60907 577 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ACSL3O95573 720 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 HLA-DQB2P05538 268 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 AVPR1AP37288 418 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ELK3P41970 407 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 FAM193AP78312 1265 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 SLC10A7Q0GE19 358 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 FSCBQ5H9T9 825 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 HP1BP3Q5SSJ5 553 aaPredicted RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 C6orf118Q5T5N4 469 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 MARC1Q5VT66 337 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ZNF783Q6ZMS7 281 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ZBED8Q8IZ13 594 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 HJURPQ8NCD3 748 aaPredicted RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 FBXO36Q8NEA4 188 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 ITFG1Q8TB96 612 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 TADA1Q96BN2 335 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 TIFAQ96CG3 184 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 OXNAD1Q96HP4 312 aaPredicted RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 PLAC1Q9HBJ0 212 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 XAB2Q9HCS7 855 aaKnown RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 RSPH14Q9UHP6 348 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 NYNRINQ9P2P1 1898 aaKnown RBP11.19□□□□□ -0.62
ECM1-201ENST00000346569 MUC3AQ02505 3323 aa11.19□□□□□ -0.62
ECM1-201ENST00000346569 E7EVH7 732 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 F5H423 210 aaPredicted RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 SCAMP3O14828 347 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 ZMPSTE24O75844 475 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 GLP2RO95838 553 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 CEBPBP17676 345 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 MMP13P45452 471 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 IHHQ14623 411 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 STAT4Q14765 748 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 ZNF77Q15935 545 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 CCDC38Q502W7 563 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 MPPE1Q53F39 396 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 FYB2Q5VWT5 728 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 TMC5Q6UXY8 1006 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 C3orf62Q6ZUJ4 267 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 ARID3BQ8IVW6 561 aaPredicted RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 KIAA1958Q8N8K9 716 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 TDRD5Q8NAT2 981 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 SPATA22Q8NHS9 363 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 UHMK1Q8TAS1 419 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 RUFY1Q96T51 708 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 SLC25A51Q9H1U9 297 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 CASS4Q9NQ75 786 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 DZANK1Q9NVP4 752 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 AAR2Q9Y312 384 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 MRPS23Q9Y3D9 190 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 XIRP2A4UGR9 3374 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 SDR42E2A6NKP2 422 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 GOLGA8KD6RF30 607 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 LUC7L3O95232 432 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 PRAMEF12O95522 483 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 CD160O95971 181 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 C1QAP02745 245 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 RHOCP08134 193 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 SSTR1P30872 391 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 ADRA1AP35348 466 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 IFFO1Q0D2I5 559 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 NIPAL4Q0D2K0 466 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 HYAL1Q12794 435 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 USP4Q13107 963 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 MTM1Q13496 603 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 SPARCL1Q14515 664 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 PRPSAP1Q14558 356 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 LBRQ14739 615 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 CBX2Q14781 532 aaPredicted RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 TTMPQ5BVD1 217 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
ECM1-201ENST00000346569 TNFAIP8L3Q5GJ75 292 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 AGBL2Q5U5Z8 902 aa11.18□□□□□ -0.62
ECM1-201ENST00000346569 RNF219Q5W0B1 726 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms