RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 WNT8BQ93098 351 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 POLR1BQ9H9Y6 1135 aa23.43■■□□□ 1.34
NPAS3-201ENST00000346562 RECQL4O94761 1208 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 ZCCHC18P0CG32 403 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 HNRNPH1P31943 449 aaKnown RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 MRPS6P82932 125 aaKnown RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 AFTPHQ6ULP2 937 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 C6orf62Q9GZU0 229 aaPredicted RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 KLHL25Q9H0H3 589 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 MOXD2PA6NHM9 499 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 PCBP1Q15365 356 aaKnown RBP eCLIP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 SAMD4BQ5PRF9 694 aaKnown RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 E5RJQ4 531 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 KRT33AO76009 404 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 ALADP13716 330 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 MIPP30301 263 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 GPR1P46091 355 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 INHBEP58166 350 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 BEX3Q00994 111 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 CNGA2Q16280 664 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 WASHC2DQ5SRD0 308 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 OTUD3Q5T2D3 398 aaPredicted RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 KYAT3Q6YP21 454 aaKnown RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 GDPD5Q8WTR4 605 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 IL22Q9GZX6 179 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 SPATA2Q9UM82 520 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 PDE2AO00408 941 aaPredicted RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 CTNNB1P35222 781 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 CDKAL1Q5VV42 579 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 RORBQ92753 470 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 RERGQ96A58 199 aaPredicted RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 BTBD10Q9BSF8 475 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 MLPHQ9BV36 600 aaPredicted RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 SPATA5L1Q9BVQ7 753 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 FTHL17Q9BXU8 183 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 BCL2L14Q9BZR8 327 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 ATP13A3Q9H7F0 1226 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 PIH1D1Q9NWS0 290 aaKnown RBP23.42■■□□□ 1.34
NPAS3-201ENST00000346562 CORO2BQ9UQ03 480 aa23.42■■□□□ 1.34
NPAS3-201ENST00000346562 MGRN1O60291 552 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 RNF44Q7L0R7 432 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 EFCAB10A6NFE3 127 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 TMEM191CA6NGB0 347 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 MAGEC1O60732 1142 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 NFKB1P19838 968 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 RPA3P35244 121 aaPredicted RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 CRATP43155 626 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 SLC25A24Q6NUK1 477 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 MIEF2Q96C03 454 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 REEP1Q9H902 201 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 IL6P05231 212 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 SNRNP27Q8WVK2 155 aaKnown RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 CENPIQ92674 756 aaPredicted RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 ERLEC1Q96DZ1 483 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 CDH9Q9ULB4 789 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 FAM86B1E9PN63 330 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 BCL10O95999 233 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 FTH1P02794 183 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 FAM86B2P0C5J1 330 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 RPL3P39023 403 aaKnown RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 CES3Q6UWW8 571 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 NINJ2Q9NZG7 142 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 LTA4HP09960 611 aaKnown RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 CHKAP35790 457 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 HNMTP50135 292 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 PSTKQ8IV42 348 aaKnown RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 IZUMO1Q8IYV9 350 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 CYP4X1Q8N118 509 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 STAG3L4Q8TBR4 150 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 LRRC39Q96DD0 335 aa23.41■■□□□ 1.34
NPAS3-201ENST00000346562 REXO4Q9GZR2 422 aaKnown RBP23.41■■□□□ 1.34
NPAS3-201ENST00000346562 PECAM1P16284 738 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 SCNN1GP51170 649 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 CDH8P55286 799 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 CELF3Q5SZQ8 465 aaKnown RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 STXBP5Q5T5C0 1151 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 KRT74Q7RTS7 529 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 SEMA4BQ9NPR2 832 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 PHGDHO43175 533 aaKnown RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 BHLHB9Q6PI77 547 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 DNAJC14Q6Y2X3 702 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 IKBIPQ70UQ0 350 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 ADGRA1Q86SQ6 560 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 GAD1Q99259 594 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 ETNK2Q9NVF9 386 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 SYNPO2Q9UMS6 1093 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 KCNK1O00180 336 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 WNT10BO00744 389 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 IRF8Q02556 426 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 RGS1Q08116 209 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 PAGE2Q7Z2X7 111 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 ULK2Q8IYT8 1036 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 KIAA0895Q8NCT3 520 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 ATXN2LQ8WWM7 1075 aaKnown RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 MMADHCQ9H3L0 296 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 CLOCKO15516 846 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 GSSP48637 474 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 DPYSL3Q14195 570 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 TCHHL1Q5QJ38 904 aaPredicted RBP23.4■■□□□ 1.34
NPAS3-201ENST00000346562 KATNAL2Q8IYT4 538 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms