RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GSDMBQ8TAX9 411 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 SPPL3Q8TCT6 385 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 POF1BQ8WVV4 589 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 HERVK_113Q902F9 699 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 STMN4Q9H169 189 aaPredicted RBP13.84□□□□□ -0.19
CDC42-202ENST00000344548 TRABDQ9H4I3 376 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■□□□□ 10.8
CDC42-202ENST00000344548 C2orf71A6NGG8 1288 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 RAMP2O60895 175 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 RFPL2O75678 378 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 MBL2P11226 248 aaPredicted RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 ETFBP38117 255 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 CCR2P41597 374 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 CHRNA4P43681 627 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 SARNPP82979 210 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 RASA2Q15283 850 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 ITPRIPL1Q6GPH6 555 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 DENND5AQ6IQ26 1287 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 TAOK1Q7L7X3 1001 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 DNAAF3Q8N9W5 541 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 IPMKQ8NFU5 416 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 MFSD3Q96ES6 412 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 SERAC1Q96JX3 654 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 FCRL5Q96RD9 977 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 CDK5RAP1Q96SZ6 601 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 NT5MQ9NPB1 228 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 CHRAC1Q9NRG0 131 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 FETUBQ9UGM5 382 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 FAM159BA6NKW6 160 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 PMPCBO75439 489 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 KRT4P19013 534 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 SMAD3P84022 425 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 SERINC3Q13530 473 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 CRYMQ14894 314 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 C9orf50Q5SZB4 431 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 MAB21L3Q8N8X9 362 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 KREMEN2Q8NCW0 462 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 BCAS4Q8TDM0 211 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 FAM107BQ9H098 131 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 SMG9Q9H0W8 520 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 CNOT10Q9H9A5 744 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 INTS9Q9NV88 658 aaKnown RBP13.83□□□□□ -0.2
CDC42-202ENST00000344548 PSAT1Q9Y617 370 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 SZT2Q5T011 3432 aa13.83□□□□□ -0.2
CDC42-202ENST00000344548 CHD5Q8TDI0 1954 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 A0A1W2PRU2 124 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 CCL16O15467 120 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 OLFM2O95897 454 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 MMP2P08253 660 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 HDCP19113 662 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 HOXD9P28356 352 aaPredicted RBP13.82□□□□□ -0.2
CDC42-202ENST00000344548 SLC11A2P49281 568 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 WDR4P57081 412 aaKnown RBP13.82□□□□□ -0.2
CDC42-202ENST00000344548 DSC2Q02487 901 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 BMPR2Q13873 1038 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 QPCTQ16769 361 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 PSRC1Q6PGN9 363 aaPredicted RBP13.82□□□□□ -0.2
CDC42-202ENST00000344548 SH2D5Q6ZV89 423 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 LRRC6Q86X45 466 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 MRGPRX2Q96LB1 330 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 NSMCE3Q96MG7 304 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 ENTPD7Q9NQZ7 604 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 GRID1Q9ULK0 1009 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 CPQQ9Y646 472 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 RPS6KL1Q9Y6S9 549 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 MYLKQ15746 1914 aa13.82□□□□□ -0.2
CDC42-202ENST00000344548 ZCWPW2A0A1B0GU75 182 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 GRM6O15303 877 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 TYROBPO43914 113 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 SPAG6O75602 509 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 ERVK-10P10266 1014 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 STX2P32856 288 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 RPA3P35244 121 aaPredicted RBP13.81□□□□□ -0.2
CDC42-202ENST00000344548 ADRA1AP35348 466 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 SF3A3Q12874 501 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDC42-202ENST00000344548 HNRNPDQ14103 355 aaKnown RBP13.81□□□□□ -0.2
CDC42-202ENST00000344548 FSCBQ5H9T9 825 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 ADGRF1Q5T601 910 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 TIGD7Q6NT04 549 aaPredicted RBP13.81□□□□□ -0.2
CDC42-202ENST00000344548 GPR65Q8IYL9 337 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 GDAP1Q8TB36 358 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 BHMTQ93088 406 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 PLD4Q96BZ4 506 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 EPN3Q9H201 632 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 SP110Q9HB58 689 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 PDFQ9HBH1 243 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 PGAM1P18669 254 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 ATP5DP30049 168 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 SLC1A5Q15758 541 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 PCSK7Q16549 785 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 MARC1Q5VT66 337 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 POTEHQ6S545 545 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 CORO1BQ9BR76 489 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 FICDQ9BVA6 458 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms