RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 LRRC37BQ96QE4 947 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 SRPK1Q96SB4 655 aaKnown RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 IL12RB2Q99665 862 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 SLC13A1Q9BZW2 595 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 NOL6Q9H6R4 1146 aaKnown RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 NPHS2Q9NP85 383 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 RBM22Q9NW64 420 aaKnown RBP eCLIP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 IPO11Q9UI26 975 aaKnown RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 CHKBQ9Y259 395 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 AAR2Q9Y312 384 aaKnown RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 FNDC1Q4ZHG4 1894 aaPredicted RBP18.95■□□□□ 0.62
HOXA9-201ENST00000343483 SHROOM3Q8TF72 1996 aa18.95■□□□□ 0.62
HOXA9-201ENST00000343483 DHRS4L1P0CG22 281 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 ETV4P43268 484 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 FBXL22Q6P050 247 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 KIF2BQ8N4N8 673 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 IGSF8Q969P0 613 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 CERS2Q96G23 380 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 ZNF512Q96ME7 567 aaPredicted RBP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 GLOD4Q9HC38 313 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 CD248Q9HCU0 757 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 PCMTD2Q9NV79 361 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 PPARGC1AQ9UBK2 798 aaKnown RBP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 PSAT1Q9Y617 370 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 EFEMP2O95967 443 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 HLA-DQB2P05538 268 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 ZDHHC11BP0C7U3 371 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 TROVE2P10155 538 aaKnown RBP eCLIP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 SKIV2L2P42285 1042 aaKnown RBP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 TUFMP49411 452 aaKnown RBP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 CDH17Q12864 832 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 PACS1Q6VY07 963 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 CDHR3Q6ZTQ4 885 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 LINC00523Q86TU6 105 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 ZNF354CQ86Y25 554 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 UMODL1-AS1Q8N2C9 162 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 IPMKQ8NFU5 416 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 PTPRN2Q92932 1015 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 VWCEQ96DN2 955 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 RPRD1AQ96P16 312 aaPredicted RBP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 UBE2OQ9C0C9 1292 aaKnown RBP18.94■□□□□ 0.62
HOXA9-201ENST00000343483 NACA2Q9H009 215 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 TXLNGQ9NUQ3 528 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 TXNDC16Q9P2K2 825 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 BACE2Q9Y5Z0 518 aa18.94■□□□□ 0.62
HOXA9-201ENST00000343483 CHUKO15111 745 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 PSMD3O43242 534 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CACNG3O60359 315 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 ANXA9O76027 345 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 UNC5CO95185 931 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 ATP6V1G2O95670 118 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 IGLV3-27P01718 113 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 NEFHP12036 1026 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CNTFP26441 200 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 NPY2RP49146 381 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 ASRGL1Q7L266 308 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CHSY1Q86X52 802 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CIR1Q86X95 450 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-201ENST00000343483 LRRC49Q8IUZ0 686 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 HMCESQ96FZ2 354 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 FCRL5Q96RD9 977 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 TTLL2Q9BWV7 592 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 IL22Q9GZX6 179 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 ARHGEF3Q9NR81 526 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CHRAC1Q9NRG0 131 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 TMEM248Q9NWD8 314 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 FNIP2Q9P278 1114 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 TRIM33Q9UPN9 1127 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 IGLV3-10A0A075B6K4 115 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 USP1O94782 785 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 NDST2P52849 883 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 NAB1Q13506 487 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 ANO4Q32M45 955 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 ANKRD20A4Q4UJ75 823 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 C1orf53Q5VUE5 145 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 TMEM135Q86UB9 458 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 RNF168Q8IYW5 571 aaPredicted RBP18.93■□□□□ 0.62
HOXA9-201ENST00000343483 NDUFAF2Q8N183 169 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 MFSD3Q96ES6 412 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 TBL1YQ9BQ87 522 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CLSTN3Q9BQT9 956 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 TSSK1BQ9BXA7 367 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 DONSONQ9NYP3 566 aa18.93■□□□□ 0.62
HOXA9-201ENST00000343483 CLTBP09497 229 aa18.92■□□□□ 0.62
HOXA9-201ENST00000343483 CCNFP41002 786 aa18.92■□□□□ 0.62
HOXA9-201ENST00000343483 KCNQ1P51787 676 aa18.92■□□□□ 0.62
HOXA9-201ENST00000343483 RING1Q06587 406 aa18.92■□□□□ 0.62
HOXA9-201ENST00000343483 OVGP1Q12889 678 aa18.92■□□□□ 0.62
HOXA9-201ENST00000343483 BAIAP2L1Q9UHR4 511 aa18.92■□□□□ 0.62
HOXA9-201ENST00000343483 ZCWPW2A0A1B0GU75 182 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 FAM237BA0A1B0GVD1 139 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 MAGEB16A2A368 324 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 CCDC78A2IDD5 438 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 AP3B1O00203 1094 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 PMPCBO75439 489 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 SEC24AO95486 1093 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 KPNA1P52294 538 aaPredicted RBP18.91■□□□□ 0.62
HOXA9-201ENST00000343483 NLRP9Q7RTR0 991 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 ZNF398Q8TD17 642 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms