RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HIST2H2AA3Q6FI13 130 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ZNF746Q6NUN9 644 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 R3HCC1LQ7Z5L2 792 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 EIF1ADQ8N9N8 165 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 DMRTB1Q96MA1 342 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TAS2R3Q9NYW6 316 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 DHRS12A0PJE2 317 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ASB14A6NK59 587 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CHL1O00533 1208 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CBX6O95503 412 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 NME3Q13232 169 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 RAB12Q6IQ22 244 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CCDC71Q8IV32 467 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 ATAD1Q8NBU5 361 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TGFBRAP1Q8WUH2 860 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ANKS1AQ92625 1134 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 MAP4K1Q92918 833 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 C11orf70Q9BRQ4 267 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 QPCTLQ9NXS2 382 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CFL2Q9Y281 166 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 LYVE1Q9Y5Y7 322 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 RPS6KL1Q9Y6S9 549 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 IFNAR1P17181 557 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 NFIAQ12857 509 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 C6orf52Q5T4I8 152 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TPGS1Q6ZTW0 290 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TIGD4Q8IY51 512 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 CPXCR1Q8N123 301 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 FSTL5Q8N475 847 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 OXR1Q8N573 874 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 POMGNT2Q8NAT1 580 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 LPCAT1Q8NF37 534 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ZFAND2BQ8WV99 257 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 NXNL1Q96CM4 212 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 FAM120BQ96EK7 910 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 ASB2Q96Q27 587 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 HGH1Q9BTY7 390 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TBC1D10AQ9BXI6 508 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PIF1Q9H611 641 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 TJP2Q9UDY2 1190 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 C5orf51A6NDU8 294 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 LDOC1O95751 146 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 RCAN1P53805 252 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 AMPD2Q01433 879 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 KCTD2Q14681 263 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 GJD3Q8N144 294 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 PTCD2Q8WV60 388 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 SEPT5Q99719 369 aaPredicted RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 ARMCX1Q9P291 453 aa6.25□□□□□ -1.41
VCAN-203ENST00000343200 ABT1Q9ULW3 272 aaKnown RBP6.25□□□□□ -1.41
VCAN-203ENST00000343200 USP19O94966 1318 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 SMIM22K7EJ46 135 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 MAGEB3O15480 346 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 MPZL2O60487 215 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ENTPD5O75356 428 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 SUPT7LO94864 414 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 PGRP06401 933 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 CD40LGP29965 261 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 LCN1P31025 176 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 NNMTP40261 264 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 GRIK3Q13003 919 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 TCIRG1Q13488 830 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 SMAD1Q15797 465 aaKnown RBP6.24□□□□□ -1.41
VCAN-203ENST00000343200 CCNYL2Q5T2Q4 361 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 CYP2R1Q6VVX0 501 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 QSOX2Q6ZRP7 698 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 FAM126BQ8IXS8 530 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 GOLM1Q8NBJ4 401 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ACBD4Q8NC06 268 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ATP6V1C2Q8NEY4 427 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 AFG1LQ8WV93 481 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 HEXDCQ8WVB3 486 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 OSBPL3Q9H4L5 887 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ARHGAP28Q9P2N2 729 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 MID1O15344 667 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 DCXO43602 365 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 C9P02748 559 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 SERPIND1P05546 499 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 PVALBP20472 110 aaPredicted RBP6.24□□□□□ -1.41
VCAN-203ENST00000343200 ARL3P36405 182 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ETV1P50549 477 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 CCR3P51677 355 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 BIKQ13323 160 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 TNFAIP1Q13829 316 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 C1orf94Q6P1W5 598 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ZNF549Q6P9A3 640 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 IFNL3Q8IZI9 196 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 METTL4Q8N3J2 472 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 MCPH1Q8NEM0 835 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 PCIF1Q9H4Z3 704 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 SNX6Q9UNH7 406 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 IQGAP1P46940 1657 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 MROH7-TTC4A0A0A0MT08 1334 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 RRN3P2A6NIE6 340 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 ANXA5P08758 320 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 HPGDP15428 266 aa6.24□□□□□ -1.41
VCAN-203ENST00000343200 S100PP25815 95 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms