RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 COL19A1Q14993 1142 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 MSS51Q4VC12 460 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 MPPE1Q53F39 396 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 C6orf118Q5T5N4 469 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 HIBCHQ6NVY1 386 aaPredicted RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 CHST9Q7L1S5 443 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 SORCS1Q8WY21 1168 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 NSMCE3Q96MG7 304 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 DDX50Q9BQ39 737 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 APOL2Q9BQE5 337 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 TRIM56Q9BRZ2 755 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 PDFQ9HBH1 243 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 NT5MQ9NPB1 228 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.141e-7■■■■■ 30.3
PMS1-201ENST00000342075 GDE1Q9NZC3 331 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 TPX2Q9ULW0 747 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 TMEM265A0A087WTH1 108 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 MATN3O15232 486 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 NCAM2O15394 837 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 CD160O95971 181 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 POU3F3P20264 500 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 CCNCP24863 283 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 TNNT3P45378 269 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 RGRP47804 291 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 STK19P49842 368 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 TUBB4BP68371 445 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 CALCOCO2Q13137 446 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 DHCR24Q15392 516 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 PARP15Q460N3 678 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 TEX44Q53QW1 395 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 BEND6Q5SZJ8 279 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 SYDE1Q6ZW31 735 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 DEFB123Q8N688 67 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 PRCCQ92733 491 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 ALG14Q96F25 216 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 OXNAD1Q96HP4 312 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 FAM114A2Q9NRY5 505 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 OR51B4Q9Y5P0 310 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 TYW5A2RUC4 315 aaKnown RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 CFAP69A5D8W1 941 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 AGGF1Q8N302 714 aaeCLIP14.16□□□□□ -0.14
PMS1-201ENST00000342075 OSCP1Q8WVF1 389 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 ERLEC1Q96DZ1 483 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 TSGA13Q96PP4 275 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 FMO2Q99518 471 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 MLPHQ9BV36 600 aaPredicted RBP14.16□□□□□ -0.14
PMS1-201ENST00000342075 ZFP14Q9HCL3 533 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 ZDHHC4Q9NPG8 344 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 HPS4Q9NQG7 708 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 ZNF510Q9Y2H8 683 aa14.16□□□□□ -0.14
PMS1-201ENST00000342075 PRAMEF11O60813 436 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 ACTN2P35609 894 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 CUL1Q13616 776 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 KCNJ11Q14654 390 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 FUT11Q495W5 492 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 TMEM215Q68D42 235 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 NAT8LQ8N9F0 302 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 BRD8Q9H0E9 1235 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 PRDM16Q9HAZ2 1276 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 PRDM6Q9NQX0 595 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 TMEM51Q9NW97 253 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 WHRNQ9P202 907 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 PAK5Q9P286 719 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 RSPH14Q9UHP6 348 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 VPS51Q9UID3 782 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 ILVBLA1L0T0 632 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 CCDC151A5D8V7 595 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 PENKP01210 267 aaPredicted RBP14.15□□□□□ -0.14
PMS1-201ENST00000342075 TNFRSF8P28908 595 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 SLC6A11P48066 632 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 OXCT1P55809 520 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 DSC2Q02487 901 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 ITKQ08881 620 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 MTA1Q13330 715 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 SETD3Q86TU7 594 aaPredicted RBP14.15□□□□□ -0.14
PMS1-201ENST00000342075 TEKT5Q96M29 485 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 RBM15Q96T37 977 aaKnown RBP eCLIP14.15□□□□□ -0.14
PMS1-201ENST00000342075 WDR83Q9BRX9 315 aaKnown RBP14.15□□□□□ -0.14
PMS1-201ENST00000342075 MAGEH1Q9H213 219 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 LRRC4CQ9HCJ2 640 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 CD207Q9UJ71 328 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 ATP8A1Q9Y2Q0 1164 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 FCF1Q9Y324 198 aaKnown RBP14.15□□□□□ -0.14
PMS1-201ENST00000342075 RAD54BQ9Y620 910 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 NUMBLQ9Y6R0 609 aa14.15□□□□□ -0.14
PMS1-201ENST00000342075 SMAD6O43541 496 aaKnown RBP14.15□□□□□ -0.15
PMS1-201ENST00000342075 FOSL2P15408 326 aa14.15□□□□□ -0.15
PMS1-201ENST00000342075 SOX9P48436 509 aa14.15□□□□□ -0.15
PMS1-201ENST00000342075 DRG2P55039 364 aaKnown RBP14.15□□□□□ -0.15
PMS1-201ENST00000342075 TFF2Q03403 129 aa14.15□□□□□ -0.15
PMS1-201ENST00000342075 TTC39BQ5VTQ0 682 aaPredicted RBP14.15□□□□□ -0.15
PMS1-201ENST00000342075 CAPN12Q6ZSI9 719 aa14.15□□□□□ -0.15
PMS1-201ENST00000342075 UHMK1Q8TAS1 419 aaKnown RBP14.15□□□□□ -0.15
PMS1-201ENST00000342075 RIPOR3Q96MK2 946 aa14.15□□□□□ -0.15
PMS1-201ENST00000342075 IL12RB2Q99665 862 aa14.15□□□□□ -0.15
PMS1-201ENST00000342075 ACE2Q9BYF1 805 aaPredicted RBP14.15□□□□□ -0.15
PMS1-201ENST00000342075 ZMPSTE24O75844 475 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms