RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 LMNB2Q03252 620 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 SPA17Q15506 151 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 CSRP2Q16527 193 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 SMTNL2Q2TAL5 461 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 ARTNQ5T4W7 220 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 C22orf39Q6P5X5 142 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 USP30Q70CQ3 517 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 RABEPKQ7Z6M1 372 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 CCDC170Q8IYT3 715 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 FRS2Q8WU20 508 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 TEKT4Q8WW24 435 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 ARHGEF2Q92974 986 aaKnown RBP19.61■□□□□ 0.73
SYNE4-202ENST00000340477 OMDQ99983 421 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 ACE2Q9BYF1 805 aaPredicted RBP19.61■□□□□ 0.73
SYNE4-202ENST00000340477 BTBD1Q9H0C5 482 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 CD93Q9NPY3 652 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 SEMA4GQ9NTN9 838 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 NDFIP2Q9NV92 336 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 WSB2Q9NYS7 404 aaPredicted RBP19.61■□□□□ 0.73
SYNE4-202ENST00000340477 INTUQ9ULD6 942 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 TNRC6BQ9UPQ9 1833 aaKnown RBP19.6■□□□□ 0.73
SYNE4-202ENST00000340477 PROSCO94903 275 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 GOT1P17174 413 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 C5AR1P21730 350 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 GLDCP23378 1020 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 ACVRL1P37023 503 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 ZNF33AQ06730 810 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 KRT81Q14533 505 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 CA9Q16790 459 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 KCNT1Q5JUK3 1230 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 WDR45BQ5MNZ6 344 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 DAB2IPQ5VWQ8 1189 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 PCDH20Q8N6Y1 951 aaKnown RBP19.6■□□□□ 0.73
SYNE4-202ENST00000340477 PIGKQ92643 395 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 HSPA12BQ96MM6 686 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 GPR174Q9BXC1 333 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 PCED1AQ9H1Q7 454 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 SGK2Q9HBY8 427 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 FBXL12Q9NXK8 326 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 ZNF292O60281 2723 aa19.6■□□□□ 0.73
SYNE4-202ENST00000340477 ARHGAP42A6NI28 874 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 RASA4BC9J798 803 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 MID1O15344 667 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 RASA4O43374 803 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 RNASEH2AO75792 299 aaKnown RBP19.59■□□□□ 0.73
SYNE4-202ENST00000340477 MT-CO1P00395 513 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 C7P10643 843 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 VAV1P15498 845 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 CDC25BP30305 580 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 SLC8A1P32418 973 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 MAN1A1P33908 653 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 HOXD12P35452 270 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 GJC1P36383 396 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 HCAR3P49019 387 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 NDST2P52849 883 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 DPYSL2Q16555 572 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 ZFYVE27Q5T4F4 411 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 TMTC1Q8IUR5 882 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 SYT12Q8IV01 421 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 RGL4Q8IZJ4 473 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 UMODL1-AS1Q8N2C9 162 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 DEFB119Q8N690 84 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 CADM4Q8NFZ8 388 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 RFFLQ8WZ73 363 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 DYRK4Q9NR20 520 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 FZD4Q9ULV1 537 aa19.59■□□□□ 0.73
SYNE4-202ENST00000340477 TMEM110-MUSTN1A8MSY1 372 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 MCF2LO15068 1137 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 BUB1O43683 1085 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 KDELR3O43731 214 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 ZMPSTE24O75844 475 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 SEMA4FO95754 770 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 PRNPP04156 253 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 KRT7P08729 469 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 ZNF806P0C7X5 589 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 RARAP10276 462 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 IL1R2P27930 398 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 ARHGAP25P42331 645 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 PTGER3P43115 390 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 MAGEA1P43355 309 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 DNA2P51530 1060 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 ARF5P84085 180 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 SLC25A11Q02978 314 aaKnown RBP19.58■□□□□ 0.72
SYNE4-202ENST00000340477 CCDC15Q0P6D6 951 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 AASDHQ4L235 1098 aaPredicted RBP19.58■□□□□ 0.72
SYNE4-202ENST00000340477 PRR23CQ6ZRP0 262 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 CYP4V2Q6ZWL3 525 aaPredicted RBP19.58■□□□□ 0.72
SYNE4-202ENST00000340477 LZTR1Q8N653 840 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 SLC35G2Q8TBE7 412 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 CASKIN2Q8WXE0 1202 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 HMCESQ96FZ2 354 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 FAM129BQ96TA1 746 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 IMPACTQ9P2X3 320 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 SUSD2Q9UGT4 822 aa19.58■□□□□ 0.72
SYNE4-202ENST00000340477 WDR87Q6ZQQ6 2873 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 A0A1W2PP55 124 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 LRRC72A6NJI9 287 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 PRR5-ARHGAP8B1AHC4 643 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 K7ERQ8 282 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 KHNYNO15037 678 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms