RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CHD9Q3L8U1 2897 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CHUKO15111 745 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 TBC1D4O60343 1298 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 EDF1O60869 148 aaKnown RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 RFPL1O75677 317 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 NEFHP12036 1026 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CCNB1P14635 433 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 DNAJB1P25685 340 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 TBX4P57082 545 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 GPR17Q13304 367 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 NAB1Q13506 487 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SPRED3Q2MJR0 410 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SPANXN3Q5MJ09 141 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 KCTD11Q693B1 232 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 GBP7Q8N8V2 638 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
LRP1-202ENST00000338962 CERS4Q9HA82 394 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 ABCF3Q9NUQ8 709 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 PRKAG3Q9UGI9 489 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SUFUQ9UMX1 484 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 SLC27A5Q9Y2P5 690 aa11.3□□□□□ -0.6
LRP1-202ENST00000338962 FAM92AA1XBS5 289 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 H7C4K7 107 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 AP3B1O00203 1094 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 SOAT2O75908 522 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 ETV4P43268 484 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 SCTRP47872 440 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 MLLT6P55198 1093 aaPredicted RBP11.29□□□□□ -0.6
LRP1-202ENST00000338962 ERVFC1P60507 584 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 NRG1Q02297 640 aaPredicted RBP11.29□□□□□ -0.6
LRP1-202ENST00000338962 NIPAL4Q0D2K0 466 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 EFEMP1Q12805 493 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 SMARCB1Q12824 385 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 RTP2Q5QGT7 225 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 FYB2Q5VWT5 728 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 NAPEPLDQ6IQ20 393 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 ARHGAP36Q6ZRI8 547 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 ANKS3Q6ZW76 656 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 ARHGAP12Q8IWW6 846 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.29□□□□□ -0.6
LRP1-202ENST00000338962 RTL3Q8N8U3 475 aaKnown RBP11.29□□□□□ -0.6
LRP1-202ENST00000338962 USP33Q8TEY7 942 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 CERS2Q96G23 380 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 SLC39A13Q96H72 371 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 C1orf74Q96LT6 269 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 MLPHQ9BV36 600 aaPredicted RBP11.29□□□□□ -0.6
LRP1-202ENST00000338962 SLC13A1Q9BZW2 595 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 CASS4Q9NQ75 786 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 TLR9Q9NR96 1032 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 TLR8Q9NR97 1041 aaKnown RBP11.29□□□□□ -0.6
LRP1-202ENST00000338962 PCMTD2Q9NV79 361 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 IL37Q9NZH6 218 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 GGT7Q9UJ14 662 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 AAR2Q9Y312 384 aaKnown RBP11.29□□□□□ -0.6
LRP1-202ENST00000338962 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
LRP1-202ENST00000338962 MAFKO60675 156 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 CCNFP41002 786 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MGAT5Q09328 741 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 CDH17Q12864 832 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 CES3Q6UWW8 571 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 LINC00523Q86TU6 105 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 NDUFAF2Q8N183 169 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 CNTD1Q8N815 330 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRP1-202ENST00000338962 ZSCAN18Q8TBC5 510 aaPredicted RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 ZNF669Q96BR6 464 aaPredicted RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 APOL2Q9BQE5 337 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 IL22Q9GZX6 179 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 RXFP1Q9HBX9 757 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 KLC4Q9NSK0 619 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 OLA1Q9NTK5 396 aaKnown RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MKS1Q9NXB0 559 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 TRIOBPQ9H2D6 2365 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MAGEB16A2A368 324 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 HMX2A2RU54 273 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MATN3O15232 486 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 PSMD3O43242 534 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 ATP9BO43861 1147 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 NEBLO76041 1014 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms