RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ARHGEF3Q9NR81 526 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 UBP1Q9NZI7 540 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 LACTBL1A8MY62 500 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 ACTN3Q08043 901 aaPredicted RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 GALNT4Q8N4A0 578 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 SCAIQ8N9R8 606 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 ZNF670Q9BS34 389 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 MLPHQ9BV36 600 aaPredicted RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 SIK3Q9Y2K2 1263 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 TLL1O43897 1013 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 LGALS2P05162 132 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 PTPN1P18031 435 aaKnown RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 RPA3P35244 121 aaPredicted RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 CCDC157Q569K6 752 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 TKTL2Q9H0I9 626 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.43□□□□□ -0.42
FN1-202ENST00000336916 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 MAGEA13PA6NCF6 341 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 TRAF2Q12933 501 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 BOP1Q14137 746 aaKnown RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 PTCD2Q8WV60 388 aaKnown RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 SLC38A2Q96QD8 506 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 BCLAF3A2AJT9 711 aaKnown RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 TAF4O00268 1085 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 OR10H2O60403 315 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 ITGAVP06756 1048 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 KCNJ1P48048 391 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 ENPEPQ07075 957 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 SLC39A12Q504Y0 691 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 RDH11Q8TC12 318 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 METTL6Q8TCB7 284 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 TAS1R2Q8TE23 839 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 HPSEQ9Y251 543 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 TRIQKQ629K1 86 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 ZDHHC13Q8IUH4 622 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 PSTKQ8IV42 348 aaKnown RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 A0A0A0MRY4 1105 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 NCF1BA6NI72 391 aaPredicted RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 NCF1CA8MVU1 366 aaPredicted RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 AKAP3O75969 853 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 NCF1P14598 390 aaPredicted RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 SHMT1P34896 483 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 NEK3P51956 506 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 ST3GAL1Q11201 340 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 VGLL4Q14135 290 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 HDDC2Q7Z4H3 204 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 SLC44A2Q8IWA5 706 aaPredicted RBP12.43□□□□□ -0.42
FN1-202ENST00000336916 APOPT1Q96IL0 206 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 SPATA13Q96N96 652 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 ZNF780BQ9Y6R6 833 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 CCDC130P13994 396 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 CLCN5P51795 746 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 PIGUQ9H490 435 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 CAPN10Q9HC96 672 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 NECTIN3Q9NQS3 549 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 TRPM6Q9BX84 2022 aa12.43□□□□□ -0.42
FN1-202ENST00000336916 TCN1P20061 433 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 ATP4AP20648 1035 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 RFX3P48380 749 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ALFQ53S48 1182 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 INO80DQ53TQ3 878 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 POLNQ7Z5Q5 900 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 HEY2Q9UBP5 337 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 GTF2A1LQ9UNN4 478 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CCNT2O60583 730 aaKnown RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 CCNA2P20248 432 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 RCN1Q15293 331 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PDZK1Q5T2W1 519 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CATSPERGQ6ZRH7 1159 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ACOX2Q99424 681 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CELF4Q9BZC1 486 aaKnown RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 DNAAF2Q9NVR5 837 aaKnown RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 SOHLH2Q9NX45 425 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 NUP188Q5SRE5 1749 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CTDNEP1O95476 244 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 TTKP33981 857 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 IRX1P78414 480 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 E2F4Q16254 413 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 SERPINA13PQ6UXR4 307 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PTAR1Q7Z6K3 402 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 ZNF607Q96SK3 696 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 HGH1Q9BTY7 390 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PCDHB9Q9Y5E1 797 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PCDHA11Q9Y5I1 949 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms