RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GALNT2Q10471 571 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 MPP3Q13368 585 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 IHHQ14623 411 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 PTPRRQ15256 657 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 FBXO48Q5FWF7 155 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 PIK3R6Q5UE93 754 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 ATG16L1Q676U5 607 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 RAP1GAP2Q684P5 730 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 STEAP4Q687X5 459 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 FAM171BQ6P995 826 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 RSPO2Q6UXX9 243 aaPredicted RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 ARCQ7LC44 396 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 CCDC91Q7Z6B0 441 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 MFSD6LQ8IWD5 586 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 PHTF2Q8N3S3 785 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 MAPK15Q8TD08 544 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 EXOC2Q96KP1 924 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 TEKT5Q96M29 485 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 ACBD6Q9BR61 282 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 FSD1LQ9BXM9 530 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 GPR62Q9BZJ7 368 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 LRRC40Q9H9A6 602 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNCA-201ENST00000336904 TLL2Q9Y6L7 1015 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 XIRP2A4UGR9 3374 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 E9PAM4 449 aa9□□□□□ -0.97
SNCA-201ENST00000336904 GSC2O15499 205 aa9□□□□□ -0.97
SNCA-201ENST00000336904 ALDH1A2O94788 518 aa9□□□□□ -0.97
SNCA-201ENST00000336904 PROCP04070 461 aa9□□□□□ -0.97
SNCA-201ENST00000336904 PDHA1P08559 390 aa9□□□□□ -0.97
SNCA-201ENST00000336904 RALBP11234 206 aa9□□□□□ -0.97
SNCA-201ENST00000336904 CPB1P15086 417 aa9□□□□□ -0.97
SNCA-201ENST00000336904 MPSTP25325 297 aa9□□□□□ -0.97
SNCA-201ENST00000336904 DSC2Q02487 901 aa9□□□□□ -0.97
SNCA-201ENST00000336904 THOC5Q13769 683 aaKnown RBP9□□□□□ -0.97
SNCA-201ENST00000336904 USP10Q14694 798 aaKnown RBP9□□□□□ -0.97
SNCA-201ENST00000336904 RCN1Q15293 331 aa9□□□□□ -0.97
SNCA-201ENST00000336904 MGAT5BQ3V5L5 792 aa9□□□□□ -0.97
SNCA-201ENST00000336904 ACSBG2Q5FVE4 666 aa9□□□□□ -0.97
SNCA-201ENST00000336904 PRSS55Q6UWB4 352 aaPredicted RBP9□□□□□ -0.97
SNCA-201ENST00000336904 CEP97Q8IW35 865 aa9□□□□□ -0.97
SNCA-201ENST00000336904 URGCPQ8TCY9 931 aa9□□□□□ -0.97
SNCA-201ENST00000336904 EXT2Q93063 718 aa9□□□□□ -0.97
SNCA-201ENST00000336904 RAB3IPQ96QF0 476 aaPredicted RBP9□□□□□ -0.97
SNCA-201ENST00000336904 SORT1Q99523 831 aa9□□□□□ -0.97
SNCA-201ENST00000336904 RBBP8Q99708 897 aa9□□□□□ -0.97
SNCA-201ENST00000336904 FRMD8Q9BZ67 464 aaPredicted RBP9□□□□□ -0.97
SNCA-201ENST00000336904 SUDS3Q9H7L9 328 aaPredicted RBP9□□□□□ -0.97
SNCA-201ENST00000336904 CSNK1G1Q9HCP0 422 aa9□□□□□ -0.97
SNCA-201ENST00000336904 TBC1D13Q9NVG8 400 aa9□□□□□ -0.97
SNCA-201ENST00000336904 RCOR3Q9P2K3 495 aaPredicted RBP9□□□□□ -0.97
SNCA-201ENST00000336904 COPG2Q9UBF2 871 aa9□□□□□ -0.97
SNCA-201ENST00000336904 TSR3Q9UJK0 312 aaKnown RBP9□□□□□ -0.97
SNCA-201ENST00000336904 PTCH2Q9Y6C5 1203 aa9□□□□□ -0.97
SNCA-201ENST00000336904 GOLGA8CPA6NN73 597 aa9□□□□□ -0.97
SNCA-201ENST00000336904 TADA2AO75478 443 aa9□□□□□ -0.97
SNCA-201ENST00000336904 PRSS56P0CW18 603 aa9□□□□□ -0.97
SNCA-201ENST00000336904 BMP1P13497 986 aa9□□□□□ -0.97
SNCA-201ENST00000336904 CPA3P15088 417 aa9□□□□□ -0.97
SNCA-201ENST00000336904 PGM1P36871 562 aa9□□□□□ -0.97
SNCA-201ENST00000336904 ACLYP53396 1101 aa9□□□□□ -0.97
SNCA-201ENST00000336904 SLC10A7Q0GE19 358 aa9□□□□□ -0.97
SNCA-201ENST00000336904 NAA25Q14CX7 972 aa9□□□□□ -0.97
SNCA-201ENST00000336904 LRRC36Q1X8D7 754 aa9□□□□□ -0.97
SNCA-201ENST00000336904 RBM20Q5T481 1227 aaKnown RBP9□□□□□ -0.97
SNCA-201ENST00000336904 TMEM198Q66K66 360 aa9□□□□□ -0.97
SNCA-201ENST00000336904 KCTD11Q693B1 232 aa9□□□□□ -0.97
SNCA-201ENST00000336904 FAM117BQ6P1L5 589 aa9□□□□□ -0.97
SNCA-201ENST00000336904 GLB1LQ6UWU2 654 aa9□□□□□ -0.97
SNCA-201ENST00000336904 ISLR2Q6UXK2 745 aa9□□□□□ -0.97
SNCA-201ENST00000336904 TAS1R1Q7RTX1 841 aa9□□□□□ -0.97
SNCA-201ENST00000336904 THEM5Q8N1Q8 247 aa9□□□□□ -0.97
SNCA-201ENST00000336904 TEX9Q8N6V9 391 aa9□□□□□ -0.97
SNCA-201ENST00000336904 CCNYL1Q8N7R7 359 aa9□□□□□ -0.97
SNCA-201ENST00000336904 NTAN1Q96AB6 310 aa9□□□□□ -0.97
SNCA-201ENST00000336904 HDAC11Q96DB2 347 aa9□□□□□ -0.97
SNCA-201ENST00000336904 HMCESQ96FZ2 354 aa9□□□□□ -0.97
SNCA-201ENST00000336904 PKMYT1Q99640 499 aa9□□□□□ -0.97
SNCA-201ENST00000336904 BTBD10Q9BSF8 475 aa9□□□□□ -0.97
SNCA-201ENST00000336904 FAM124BQ9H5Z6 455 aaPredicted RBP9□□□□□ -0.97
SNCA-201ENST00000336904 CCSER2Q9H7U1 834 aa9□□□□□ -0.97
SNCA-201ENST00000336904 CHST12Q9NRB3 414 aa9□□□□□ -0.97
SNCA-201ENST00000336904 ANKRD12Q6UB98 2062 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CA12O43570 354 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 DCXO43602 365 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 MAFKO60675 156 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 GLRA3O75311 464 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 HSPA4LO95757 839 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 AHSGP02765 367 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 MAP2K2P36507 400 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CD86P42081 329 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SERPINB9P50453 376 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 GRIK3Q13003 919 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SLC9B1Q4ZJI4 515 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 ZNF470Q6ECI4 717 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 PDZD4Q76G19 769 aaPredicted RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 PTAR1Q7Z6K3 402 aaPredicted RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 RNF148Q8N7C7 305 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 GIMAP7Q8NHV1 300 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms