RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 LSM12Q3MHD2 195 aaKnown RBP20.28■□□□□ 0.84
CDCA4-201ENST00000336219 CCDC153Q494R4 210 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 PID1Q7Z2X4 250 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 NLGN2Q8NFZ4 835 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 ZNF669Q96BR6 464 aaPredicted RBP20.28■□□□□ 0.84
CDCA4-201ENST00000336219 LENG1Q96BZ8 264 aaPredicted RBP20.28■□□□□ 0.84
CDCA4-201ENST00000336219 ZNF560Q96MR9 790 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 PHF12Q96QT6 1004 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 OSMRQ99650 979 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 LMCD1Q9NZU5 365 aa20.28■□□□□ 0.84
CDCA4-201ENST00000336219 GNEQ9Y223 722 aaKnown RBP20.28■□□□□ 0.84
CDCA4-201ENST00000336219 A0A096LPK6 155 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 JUNP05412 331 aaKnown RBP20.27■□□□□ 0.84
CDCA4-201ENST00000336219 PCSK6P29122 969 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 PRDX6P30041 224 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 LIMS2Q7Z4I7 341 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 CATSPER2Q96P56 530 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 RBBP8Q99708 897 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 NUF2Q9BZD4 464 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 EPB41L1Q9H4G0 881 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 PTTG2Q9NZH5 202 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 KLK14Q9P0G3 267 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 M0QYT0 321 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 KCNK1O00180 336 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 DCLK1O15075 740 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 TRPA1O75762 1119 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 EML3Q32P44 896 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 TNIP3Q96KP6 325 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 DUSP16Q9BY84 665 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 GALNT8Q9NY28 637 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 ADAM28Q9UKQ2 775 aa20.27■□□□□ 0.84
CDCA4-201ENST00000336219 CCDC78A2IDD5 438 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 EEF2KO00418 725 aaKnown RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 SNAI1O95863 264 aaPredicted RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 SAT1P21673 171 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 ACAT1P24752 427 aaKnown RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 TAF6P49848 677 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 NME3Q13232 169 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 SYPL2Q5VXT5 272 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 B3GNT6Q6ZMB0 384 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 BNC2Q6ZN30 1099 aaPredicted RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 KYQ8NBH2 561 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 B3GALNT2Q8NCR0 500 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 KLHL32Q96NJ5 620 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 DNAI2Q9GZS0 605 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 RBM38Q9H0Z9 239 aaKnown RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 LRRC40Q9H9A6 602 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 GOLGA2P5Q9HBQ8 144 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 KLHL8Q9P2G9 620 aaPredicted RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 STAP1Q9ULZ2 295 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 TK2O00142 265 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 BEST1O76090 585 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 HOXD8P13378 290 aaPredicted RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 PNPLA4P41247 253 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 SERPINB8P50452 374 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 LIMK2P53671 638 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 RPL26P61254 145 aaKnown RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 HSP90AA5PQ58FG0 334 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 PIGGQ5H8A4 983 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 RARS2Q5T160 578 aaKnown RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 PTAR1Q7Z6K3 402 aaPredicted RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 OSTM1Q86WC4 334 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 CDCA5Q96FF9 252 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 HNRNPABQ99729 332 aaKnown RBP20.26■□□□□ 0.83
CDCA4-201ENST00000336219 PIGVQ9NUD9 493 aa20.26■□□□□ 0.83
CDCA4-201ENST00000336219 THRAP10827 490 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 SMPD1P17405 629 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 PTPN3P26045 913 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 SPRP35270 261 aaPredicted RBP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 NDUFV1P49821 464 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 SOX4Q06945 474 aaPredicted RBP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 AMIGO2Q86SJ2 522 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 TMEM135Q86UB9 458 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 GPRC5AQ8NFJ5 357 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 SGIP1Q9BQI5 828 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 SENP6Q9GZR1 1112 aaPredicted RBP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 NDUFA13Q9P0J0 144 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 RGSL1A5PLK6 1076 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 PDLIM1O00151 329 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 CLDN5O00501 218 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 TRIM13O60858 407 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 AP2A1O95782 977 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 PENKP01210 267 aaPredicted RBP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 DARSP14868 501 aaKnown RBP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 NELFEP18615 380 aaKnown RBP20.25■□□□□ 0.83
CDCA4-201ENST00000336219 GLRBP48167 497 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 NUMBP49757 651 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 NXNQ6DKJ4 435 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 WNT8BQ93098 351 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 MFSD3Q96ES6 412 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 APOL2Q9BQE5 337 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 VANGL2Q9ULK5 521 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 TMCO1Q9UM00 188 aa20.25■□□□□ 0.83
CDCA4-201ENST00000336219 ZCWPW2A0A1B0GU75 182 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 HUS1O60921 280 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 C2P06681 752 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 NPR3P17342 541 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 CYLC2Q14093 348 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms