RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RBP3P10745 1247 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 VAV1P15498 845 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 EIF3EP60228 445 aaKnown RBP17.85■□□□□ 0.45
CHGA-202ENST00000334654 ZNF33AQ06730 810 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 OASLQ15646 514 aaKnown RBP17.85■□□□□ 0.45
CHGA-202ENST00000334654 CCNG2Q16589 344 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 FAM182AQ5T1J6 154 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 EGFLAMQ63HQ2 1017 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 ZNF354CQ86Y25 554 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 CCNYQ8ND76 341 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 MAML1Q92585 1016 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 EXOC4Q96A65 974 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 QKIQ96PU8 341 aaKnown RBP eCLIP17.85■□□□□ 0.45
CHGA-202ENST00000334654 ACOX2Q99424 681 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 AP1M1Q9BXS5 423 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 FOXQ1Q9C009 403 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 BRD8Q9H0E9 1235 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 USP29Q9HBJ7 922 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 ZDHHC4Q9NPG8 344 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 RBM12Q9NTZ6 932 aaKnown RBP17.85■□□□□ 0.45
CHGA-202ENST00000334654 RNF14Q9UBS8 474 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 CDC23Q9UJX2 597 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 HPCAL4Q9UM19 191 aa17.85■□□□□ 0.45
CHGA-202ENST00000334654 HACD1B0YJ81 288 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 PPP1R12AO14974 1030 aaPredicted RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 MATN3O15232 486 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 SMAD6O43541 496 aaKnown RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 ZNF821O75541 412 aaPredicted RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 ATP5BP06576 529 aaKnown RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 SRCP12931 536 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 SLC20A2Q08357 652 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 ENPP2Q13822 863 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 ZNF234Q14588 700 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 CYP1B1Q16678 543 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 SLC45A4Q5BKX6 768 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 NUDT18Q6ZVK8 323 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 SH2D3CQ8N5H7 860 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 NKD2Q969F2 451 aaPredicted RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 NAP1L3Q99457 506 aaPredicted RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 FRMD8P1Q9BZ68 369 aaPredicted RBP17.84■□□□□ 0.45
CHGA-202ENST00000334654 TBC1D17Q9HA65 648 aa17.84■□□□□ 0.45
CHGA-202ENST00000334654 BCLAF3A2AJT9 711 aaKnown RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 ZSCAN5CA6NGD5 496 aaPredicted RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 SRPRAP08240 638 aaKnown RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 RBL1P28749 1068 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 SERPINH1P50454 418 aaKnown RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 SEC13P55735 322 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 SLC10A7Q0GE19 358 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 CYTH1Q15438 398 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 INO80DQ53TQ3 878 aaPredicted RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 RETSATQ6NUM9 610 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 DRICH1Q6PGQ1 229 aaPredicted RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 TRIM67Q6ZTA4 783 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 CCDC13Q8IYE1 715 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 TEX26Q8N6G2 289 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 C12orf50Q8NA57 414 aaPredicted RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 KDM1BQ8NB78 822 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 USP33Q8TEY7 942 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 FRS2Q8WU20 508 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 TFB1MQ8WVM0 346 aaKnown RBP17.83■□□□□ 0.45
CHGA-202ENST00000334654 ZNF599Q96NL3 588 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 NELL2Q99435 816 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 TMEM245Q9H330 911 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 SP110Q9HB58 689 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 MRFAP1Q9Y605 127 aa17.83■□□□□ 0.45
CHGA-202ENST00000334654 CKAP5Q14008 2032 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 FAM170BA6NMN3 283 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 WASH3PC4AMC7 463 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 H7C0C1 242 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 KCNK1O00180 336 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 KRIT1O00522 736 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 MCF2LO15068 1137 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 ATP9BO43861 1147 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 PDGFBP01127 241 aaPredicted RBP17.82■□□□□ 0.44
CHGA-202ENST00000334654 TIE1P35590 1138 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 IL12RB1P42701 662 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 ATP5OP48047 213 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 CLCN6P51797 869 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 AP1B1Q10567 949 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 WASHC5Q12768 1159 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 HNRNPDQ14103 355 aaKnown RBP17.82■□□□□ 0.44
CHGA-202ENST00000334654 FBXO43Q4G163 708 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 DGKKQ5KSL6 1271 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 TTC27Q6P3X3 843 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 ZNF513Q8N8E2 541 aaPredicted RBP17.82■□□□□ 0.44
CHGA-202ENST00000334654 IL17RCQ8NAC3 791 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 KCNV2Q8TDN2 545 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 UCMAQ8WVF2 138 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 IL12RB2Q99665 862 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 UBA2Q9UBT2 640 aaPredicted RBP17.82■□□□□ 0.44
CHGA-202ENST00000334654 PLA2G4CQ9UP65 541 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 MRPS17Q9Y2R5 130 aaKnown RBP17.82■□□□□ 0.44
CHGA-202ENST00000334654 TTC34A8MYJ7 566 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 MUSKO15146 869 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 RNF40O75150 1001 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 CCNB1P14635 433 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 KCNJ1P48048 391 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 NRLP54845 237 aa17.82■□□□□ 0.44
CHGA-202ENST00000334654 IFI35P80217 286 aaPredicted RBP17.82■□□□□ 0.44
CHGA-202ENST00000334654 ZBTB17Q13105 803 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms