RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IST1P53990 364 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 DPYSQ14117 519 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PDK4Q16654 411 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SWI5Q1ZZU3 235 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PARP6Q2NL67 630 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 RFX4Q33E94 735 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 C3orf67Q6ZVT6 689 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ILDR2Q71H61 639 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF655Q8N720 491 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 FKBP14Q9NWM8 211 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ABI2Q9NYB9 513 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 NKIRAS2Q9NYR9 191 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 RPL26L1Q9UNX3 145 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 NCOA3Q9Y6Q9 1424 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 FAM47E-STBD1D6RA91 191 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 BTN3A1O00481 513 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 USP12O75317 370 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 NR3C2P08235 984 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ERVK-10P10266 1014 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CYP2B6P20813 491 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ACO1P21399 889 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CDC42EP1Q00587 391 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PRAMEF18Q5VWM3 479 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SLC9A4Q6AI14 798 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CXXC5Q7LFL8 322 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 EGFL6Q8IUX8 553 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PIK3C3Q8NEB9 887 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 RP9Q8TA86 221 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CELF6Q96J87 481 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ASB2Q96Q27 587 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TMEM216Q9P0N5 145 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 MED14O60244 1454 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 A0A0U1RQJ8 604 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 FAM172BPA6NC97 362 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ARHGEF33A8MVX0 844 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 OGTO15294 1046 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ZC3H11AO75152 810 aaKnown RBP eCLIP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CSDE1O75534 798 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 LSM8O95777 96 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CYP2A7P20853 494 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SLC11A2P49281 568 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CDK9P50750 372 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 GIT2Q14161 759 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PLET1Q6UQ28 207 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 FAM220AQ7Z4H9 259 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SLC41A1Q8IVJ1 513 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CARNMT1Q8N4J0 409 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TRPV1Q8NER1 839 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SLC47A1Q96FL8 570 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SERAC1Q96JX3 654 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TBL1YQ9BQ87 522 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TTYH1Q9H313 450 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CAB39LQ9H9S4 337 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 MOV10Q9HCE1 1003 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ARL8BQ9NVJ2 186 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PRMT7Q9NVM4 692 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 AHSPQ9NZD4 102 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 RPS6KA6Q9UK32 745 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TBC1D24Q9ULP9 559 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 A0A0X1KG70 313 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 FAM240BA0A1B0GVZ2 78 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 DHRS12A0PJE2 317 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 UBE2Q2LH0YL09 131 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 BNIP2Q12982 314 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CBWD3Q5JTY5 395 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CBWD5Q5RIA9 395 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SAMD3Q8N6K7 520 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 HTR3CQ8WXA8 447 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SLC4A9Q96Q91 983 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TDRD1Q9BXT4 1180 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 BHLHE41Q9C0J9 482 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 MTIF3Q9H2K0 278 aaKnown RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ANKEF1Q9NU02 776 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 LNPEPQ9UIQ6 1025 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PLCL2Q9UPR0 1127 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 C6orf222P0C671 652 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TUBA1BP68363 451 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SCRN3Q0VDG4 424 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ST3GAL1Q11201 340 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TAF13Q15543 124 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TAF1CQ15572 869 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 GCNT7Q6ZNI0 430 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TUBA1AQ71U36 451 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 HPS6Q86YV9 775 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CHPFQ8IZ52 775 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 SMYD1Q8NB12 490 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 RIT2Q99578 217 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 GPN1Q9HCN4 374 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 GPRC5CQ9NQ84 441 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 WDR37Q9Y2I8 494 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TRIM3O75382 744 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 FDX1P10109 184 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ABCG1P45844 678 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TOB1P50616 345 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CEBPGP53567 150 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 DPYSL3Q14195 570 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms