RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CCDC90BQ9GZT6 254 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 FBXO6Q9NRD1 293 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 VANGL2Q9ULK5 521 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 DAB1O75553 588 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 RHOCP08134 193 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 DRG2P55039 364 aaKnown RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 FLOT2Q14254 428 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 TCHHL1Q5QJ38 904 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 XYLT1Q86Y38 959 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 DTNBP1Q96EV8 351 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 FSD1LQ9BXM9 530 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 CXXC1Q9P0U4 656 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 GRID1Q9ULK0 1009 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 FAM50BQ9Y247 325 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 DOCK5Q9H7D0 1870 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 CYP1A1P04798 512 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 DAOAP59103 153 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 EFTUD2Q15029 972 aaKnown RBP eCLIP12.01□□□□□ -0.495e-7■■■■■ 27.2
HDAC6-201ENST00000334136 RNF19BQ6ZMZ0 732 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 GET4Q7L5D6 327 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TFAP2DQ7Z6R9 452 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 UCMAQ8WVF2 138 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 IRGQQ8WZA9 623 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 IFT43Q96FT9 208 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 ZNF184Q99676 751 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 APPL1Q9UKG1 709 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 DNAJC16Q9Y2G8 782 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TRIP12Q14669 1992 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 F8W810 466 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 PAPSS1O43252 624 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 SH3BP5O60239 455 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 ETS2P15036 469 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 SERPINB5P36952 375 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 ELK3P41970 407 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 LACTB2Q53H82 288 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 ATP6V1E2Q96A05 226 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TMEM209Q96SK2 561 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 C17orf80Q9BSJ5 609 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 SLC24A2Q9UI40 661 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 VPS28Q9UK41 221 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 MDM4O15151 490 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TEX28O15482 410 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 MGRN1O60291 552 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 CLPTM1O96005 669 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 CCDC85BQ15834 202 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
HDAC6-201ENST00000334136 IRGCQ6NXR0 463 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 SPOCD1Q6ZMY3 1216 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 DENND1CQ8IV53 801 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 LRRC57Q8N9N7 239 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 C3orf58Q8NDZ4 430 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 FAM13CQ8NE31 585 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 CIPCQ9C0C6 399 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 MAN1C1Q9NR34 630 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TRIOBPQ9H2D6 2365 aa12.01□□□□□ -0.49
HDAC6-201ENST00000334136 TMEM191CA6NGB0 347 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 E9PBE3 544 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 AKAP10O43572 662 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 KLHL41O60662 606 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 HOXC8P31273 242 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 PLEKHA7Q6IQ23 1121 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 ING5Q8WYH8 240 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 RIPOR3Q96MK2 946 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 OR12D3Q9UGF7 316 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 PACSIN3Q9UKS6 424 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 BAG5Q9UL15 447 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 ATXN2Q99700 1313 aaKnown RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 ZNF189O75820 626 aaPredicted RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 OAZ2O95190 189 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 CTSAP10619 480 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 ETFBP38117 255 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 SLC25A52Q3SY17 297 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 RNF220Q5VTB9 566 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 ALKAL1Q6UXT8 129 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 MON1BQ7L1V2 547 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 TMPRSS6Q8IU80 811 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 SGF29Q96ES7 293 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 NRBF2Q96F24 287 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 OXNAD1Q96HP4 312 aaPredicted RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 C12orf65Q9H3J6 166 aaKnown RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 PIH1D1Q9NWS0 290 aaKnown RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 PAK5Q9P286 719 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 CORO1CQ9ULV4 474 aaPredicted RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 BACE2Q9Y5Z0 518 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 FAM237BA0A1B0GVD1 139 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 A0A1W2PPM1 405 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 YJEFN3A6XGL0 299 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 E7ENQ6 273 aa12□□□□□ -0.49
HDAC6-201ENST00000334136 HAPLN1P10915 354 aaPredicted RBP12□□□□□ -0.49
HDAC6-201ENST00000334136 OR1E1P30953 314 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms