RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ELOVL6Q9H5J4 265 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 NINJ2Q9NZG7 142 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 MPP6Q9NZW5 540 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 NOCTQ9UK39 431 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 A0A096LPK6 155 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 RCCD1A6NED2 376 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 VNN1O95497 513 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 STAU1O95793 577 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 DNTTP04053 509 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 CTSEP14091 401 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 H2AFXP16104 143 aaPredicted RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 DGKAP23743 735 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 LMO2P25791 158 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 PEX6Q13608 980 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 TP53BP2Q13625 1128 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ANKS6Q68DC2 871 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 C16orf89Q6UX73 402 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 CACUL1Q86Y37 369 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 SYTL1Q8IYJ3 562 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 FUT8Q9BYC5 575 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 DPEP3Q9H4B8 488 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ELAC1Q9H777 363 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 GDF3Q9NR23 364 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 PPFIA2O75334 1257 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 RGS20O76081 388 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 SKP1P63208 163 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 SLC20A2Q08357 652 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 TRAPPC5Q8IUR0 188 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 TMEM192Q8IY95 271 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 FBXO39Q8N4B4 442 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 NKAPQ8N5F7 415 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 HEXDCQ8WVB3 486 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 P2RY11Q96G91 374 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 PPP1R36Q96LQ0 422 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 LGMNQ99538 433 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ZFP14Q9HCL3 533 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 CPQQ9Y646 472 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 KCNU1A8MYU2 1149 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 DYRK3O43781 588 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 KELP23276 732 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 LBX1P52954 281 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 HADHBP55084 474 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 IL2P60568 153 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 INPP5AQ14642 412 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 TEX44Q53QW1 395 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ZDHHC20Q5W0Z9 365 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 RD3Q7Z3Z2 195 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 FAM136AQ96C01 138 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 TTYH3Q9C0H2 523 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 GLOD4Q9HC38 313 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 IGKV6D-21A0A0A0MT36 114 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 C2CD4BA6NLJ0 364 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 E9PAM4 449 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 PAPSS1O43252 624 aaPredicted RBP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 LRPAP1P30533 357 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 CLCN5P51795 746 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 ESRRGP62508 458 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 AP2B1P63010 937 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 KDSRQ06136 332 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 BMPR2Q13873 1038 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 PHKG1Q16816 387 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 AASDHQ4L235 1098 aaPredicted RBP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 SEL1L3Q68CR1 1132 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 TIFAQ96CG3 184 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 MAGEB18Q96M61 343 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 CERS4Q9HA82 394 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 RAB23Q9ULC3 237 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 C1orf232A0A0U1RR37 186 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 RNF103-CHMP3A0A140T963 221 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 TRIM13O60858 407 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 FAM107AO95990 144 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 SYN1P17600 705 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 PGM1P36871 562 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 GPD2P43304 727 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 GPR1P46091 355 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 WNT3AP56704 352 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 PRKCQQ04759 706 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 GAD2Q05329 585 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 CERS2Q96G23 380 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 ARIH1Q9Y4X5 557 aaPredicted RBP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 YIPF1Q9Y548 306 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 PCDHB9Q9Y5E1 797 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 KATNA1O75449 491 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 ENO1P06733 434 aaKnown RBP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 ZSCAN5DPP0CG00 497 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 ERVK-10P10266 1014 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 DDX6P26196 483 aaKnown RBP eCLIP11.38□□□□□ -0.59
POLR1B-202ENST00000333990 HPCAP84074 193 aa11.38□□□□□ -0.59
POLR1B-202ENST00000333990 KRT72Q14CN4 511 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms