RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 DCTN2Q13561 401 aaKnown RBP24.02■■□□□ 1.44
TSKU-201ENST00000333090 CELF3Q5SZQ8 465 aaKnown RBP24.02■■□□□ 1.44
TSKU-201ENST00000333090 CERCAMQ5T4B2 595 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 KCNMB4Q86W47 210 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 TRIML2Q8N7C3 387 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 TSPAN14Q8NG11 270 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 CCT7Q99832 543 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 SLC2A11Q9BYW1 496 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 ZNF385DQ9H6B1 395 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 MID2Q9UJV3 735 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 TLK1Q9UKI8 766 aa24.02■■□□□ 1.44
TSKU-201ENST00000333090 CCDC78A2IDD5 438 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 ZNF26P17031 533 aaPredicted RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 ADARP55265 1226 aaKnown RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 BORAQ6PGQ7 559 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 ZYG11AQ6WRX3 759 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 ABTB1Q969K4 478 aaPredicted RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 MAF1Q9H063 256 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 AKT3Q9Y243 479 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 COPG1Q9Y678 874 aaKnown RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 SLC22A2O15244 555 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 TADA2AO75478 443 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 STAU1O95793 577 aaKnown RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 PDGFRBP09619 1106 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 RPS12P25398 132 aaKnown RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 BAG6P46379 1132 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 CLCN2P51788 898 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 PITX1P78337 314 aaPredicted RBP24.01■■□□□ 1.43
TSKU-201ENST00000333090 TMED1Q13445 227 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 MGAT5BQ3V5L5 792 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 PRDM16Q9HAZ2 1276 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 EPS15L1Q9UBC2 864 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 GMEB1Q9Y692 573 aa24.01■■□□□ 1.43
TSKU-201ENST00000333090 C7orf72A4D263 438 aa24■■□□□ 1.43
TSKU-201ENST00000333090 HBP1O60381 514 aa24■■□□□ 1.43
TSKU-201ENST00000333090 VTNP04004 478 aa24■■□□□ 1.43
TSKU-201ENST00000333090 FGFR3P22607 806 aa24■■□□□ 1.43
TSKU-201ENST00000333090 AVPR1AP37288 418 aa24■■□□□ 1.43
TSKU-201ENST00000333090 PPIDQ08752 370 aaKnown RBP24■■□□□ 1.43
TSKU-201ENST00000333090 STRADAQ7RTN6 431 aa24■■□□□ 1.43
TSKU-201ENST00000333090 TSNARE1Q96NA8 513 aa24■■□□□ 1.43
TSKU-201ENST00000333090 CHRAC1Q9NRG0 131 aa24■■□□□ 1.43
TSKU-201ENST00000333090 XPO1O14980 1071 aaKnown RBP24■■□□□ 1.43
TSKU-201ENST00000333090 SBK3P0C264 359 aa24■■□□□ 1.43
TSKU-201ENST00000333090 BST2Q10589 180 aaKnown RBP24■■□□□ 1.43
TSKU-201ENST00000333090 GRM3Q14832 879 aa24■■□□□ 1.43
TSKU-201ENST00000333090 KIZQ2M2Z5 673 aa24■■□□□ 1.43
TSKU-201ENST00000333090 PSTKQ8IV42 348 aaKnown RBP24■■□□□ 1.43
TSKU-201ENST00000333090 DEFB106AQ8N104 65 aa24■■□□□ 1.43
TSKU-201ENST00000333090 FAM124BQ9H5Z6 455 aaPredicted RBP24■■□□□ 1.43
TSKU-201ENST00000333090 COQ10BQ9H8M1 238 aa24■■□□□ 1.43
TSKU-201ENST00000333090 LIN28AQ9H9Z2 209 aaKnown RBP24■■□□□ 1.43
TSKU-201ENST00000333090 RNF11Q9Y3C5 154 aa24■■□□□ 1.43
TSKU-201ENST00000333090 TCAF2A6NFQ2 919 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 TMEM233B4DJY2 109 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 C22orf31O95567 290 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 CCDC166P0CW27 439 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 NSUN2Q08J23 767 aaKnown RBP eCLIP23.99■■□□□ 1.43
TSKU-201ENST00000333090 ADRM1Q16186 407 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 CHERPQ8IWX8 916 aaKnown RBP23.99■■□□□ 1.43
TSKU-201ENST00000333090 PCDH20Q8N6Y1 951 aaKnown RBP23.99■■□□□ 1.43
TSKU-201ENST00000333090 SLC7A14Q8TBB6 771 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 TMIGD2Q96BF3 282 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 ZNF512Q96ME7 567 aaPredicted RBP23.99■■□□□ 1.43
TSKU-201ENST00000333090 HAUS8Q9BT25 410 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 NFKBIZQ9BYH8 718 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 RCOR3Q9P2K3 495 aaPredicted RBP23.99■■□□□ 1.43
TSKU-201ENST00000333090 ARHGEF37A1IGU5 675 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 AP2A1O95782 977 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 CAPNS1P04632 268 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 APOA4P06727 396 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 TPH1P17752 444 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 ADSLP30566 484 aaPredicted RBP23.99■■□□□ 1.43
TSKU-201ENST00000333090 CREB5Q02930 508 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 HERC3Q15034 1050 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 FAM187BQ17R55 369 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 DCAF6Q58WW2 860 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 LBX2Q6XYB7 198 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 ALDH16A1Q8IZ83 802 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 TMEM151AQ8N4L1 468 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 KCTD4Q8WVF5 259 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 PCDHAC1Q9H158 963 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 SMARCAD1Q9H4L7 1026 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 VTI1BQ9UEU0 232 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 RSL24D1Q9UHA3 163 aaKnown RBP23.99■■□□□ 1.43
TSKU-201ENST00000333090 PADI4Q9UM07 663 aa23.99■■□□□ 1.43
TSKU-201ENST00000333090 EMP3P54852 163 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 CCNYL1Q8N7R7 359 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 CAAP1Q9H8G2 361 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 RNF19AQ9NV58 838 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 RUVBL2Q9Y230 463 aaKnown RBP23.98■■□□□ 1.43
TSKU-201ENST00000333090 AP4S1Q9Y587 144 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 HEMK1Q9Y5R4 338 aaPredicted RBP23.98■■□□□ 1.43
TSKU-201ENST00000333090 FZD9O00144 591 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 TRIM38O00635 465 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 CABYRO75952 493 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 CYP2C8P10632 490 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 PTPN3P26045 913 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 MATKP42679 507 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 BCAT1P54687 386 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms