RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MINDY2Q8NBR6 621 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 ZNF641Q96N77 438 aaPredicted RBP24.72■■□□□ 1.55
SOX1-201ENST00000330949 SNX15Q9NRS6 342 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 NXF1Q9UBU9 619 aaKnown RBP24.72■■□□□ 1.55
SOX1-201ENST00000330949 VTI1BQ9UEU0 232 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 HEATR9A2RTY3 570 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 SLCO1B7G3V0H7 640 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 APOL1O14791 398 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 NPM3O75607 178 aaKnown RBP24.72■■□□□ 1.55
SOX1-201ENST00000330949 SEC24DO94855 1032 aaPredicted RBP24.72■■□□□ 1.55
SOX1-201ENST00000330949 METTL18O95568 372 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 ASS1P00966 412 aaKnown RBP24.72■■□□□ 1.55
SOX1-201ENST00000330949 PTPN2P17706 415 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 MERTKQ12866 999 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 DENND1BQ6P3S1 775 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 KCTD8Q6ZWB6 473 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 PEBP4Q96S96 227 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 CTRCQ99895 268 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 SYNPO2Q9UMS6 1093 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 STYXL1Q9Y6J8 313 aa24.72■■□□□ 1.55
SOX1-201ENST00000330949 NDUFB5O43674 189 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 CCNE2O96020 404 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 NME3Q13232 169 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 INTS11Q5TA45 600 aaKnown RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 TMEM198Q66K66 360 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 TTLL6Q8N841 843 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 FAM151AQ8WW52 585 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 GATA5Q9BWX5 397 aaPredicted RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 TANC1Q9C0D5 1861 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 LDHAP00338 332 aaKnown RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 ALOX5P09917 674 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 CEP170P1Q96L14 293 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 CNTNAP1P78357 1384 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 HSPA1AP0DMV8 641 aaKnown RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 HSPA1BP0DMV9 641 aaKnown RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 GP5P40197 560 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 GRIA1P42261 906 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 FKBP1AP62942 108 aaKnown RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 FER1L6Q2WGJ9 1857 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 XYLT1Q86Y38 959 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 CDKL3Q8IVW4 592 aaPredicted RBP24.71■■□□□ 1.55
SOX1-201ENST00000330949 OTUD5Q96G74 571 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 LHX5Q9H2C1 402 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 FEM1BQ9UK73 627 aa24.71■■□□□ 1.55
SOX1-201ENST00000330949 CHRNGP07510 517 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 SFNP31947 248 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ABRAXAS1Q6UWZ7 409 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 CLEC4DQ8WXI8 215 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 HPS1Q92902 700 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ALPK1Q96QP1 1244 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ZNF347Q96SE7 839 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 NDEL1Q9GZM8 345 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 UPF3AQ9H1J1 476 aaKnown RBP24.7■■□□□ 1.54
SOX1-201ENST00000330949 ADAMTS10Q9H324 1103 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 PARVBQ9HBI1 364 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 CD320Q9NPF0 282 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 MID2Q9UJV3 735 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 UBIAD1Q9Y5Z9 338 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 COPG1Q9Y678 874 aaKnown RBP24.7■■□□□ 1.54
SOX1-201ENST00000330949 E2F8A0AVK6 867 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 TIPRLO75663 272 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ICAM1P05362 532 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 TFEBP19484 476 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ZNF618Q5T7W0 954 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ERMP1Q7Z2K6 904 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ZBTB46Q86UZ6 589 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 CADM3Q8N126 398 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 TMCO5AQ8N6Q1 288 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 MCPH1Q8NEM0 835 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 RMDN3Q96TC7 470 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 NIF3L1Q9GZT8 377 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 VTA1Q9NP79 307 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 MTMR10Q9NXD2 777 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 ERVK-11Q9UQG0 969 aa24.7■■□□□ 1.54
SOX1-201ENST00000330949 CTDP1Q9Y5B0 961 aaPredicted RBP24.7■■□□□ 1.54
SOX1-201ENST00000330949 E7ENX8 843 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 PRKAA1Q13131 559 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 SLC36A3Q495N2 470 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 CMC1Q7Z7K0 106 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 CBR4Q8N4T8 237 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 PCDH20Q8N6Y1 951 aaKnown RBP24.69■■□□□ 1.54
SOX1-201ENST00000330949 PQLC3Q8N755 202 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 SYTL5Q8TDW5 730 aaPredicted RBP24.69■■□□□ 1.54
SOX1-201ENST00000330949 ARMC1Q9NVT9 282 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 RBMX2Q9Y388 322 aaKnown RBP24.69■■□□□ 1.54
SOX1-201ENST00000330949 AFG3L2Q9Y4W6 797 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 TRIM24O15164 1050 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 ATG7O95352 703 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 HMGCRP04035 888 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 MLNP12872 115 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 MAGEA12P43365 314 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 SLFN12LQ6IEE8 588 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 CYP2R1Q6VVX0 501 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 FAM160B2Q86V87 743 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 PLD6Q8N2A8 252 aaKnown RBP24.69■■□□□ 1.54
SOX1-201ENST00000330949 PNPT1Q8TCS8 783 aaKnown RBP24.69■■□□□ 1.54
SOX1-201ENST00000330949 ISL2Q96A47 359 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 KLHL25Q9H0H3 589 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 ADAM28Q9UKQ2 775 aa24.69■■□□□ 1.54
SOX1-201ENST00000330949 FZD1Q9UP38 647 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms