RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 LRRC43Q8N309 656 aa14.69□□□□□ -0.06
SNX20-202ENST00000330943 ASB9Q96DX5 294 aa14.69□□□□□ -0.06
SNX20-202ENST00000330943 TEPSINQ96N21 525 aa14.69□□□□□ -0.06
SNX20-202ENST00000330943 SLC29A1Q99808 456 aa14.69□□□□□ -0.06
SNX20-202ENST00000330943 OLAHQ9NV23 265 aa14.69□□□□□ -0.06
SNX20-202ENST00000330943 KCNU1A8MYU2 1149 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 C9IYK1 514 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 GOLGA8TH3BQL2 631 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PLOD2O00469 737 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 COQ9O75208 318 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 SUPT3HO75486 399 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 RPL10P27635 214 aaKnown RBP14.68□□□□□ -0.06
SNX20-202ENST00000330943 NSUN2Q08J23 767 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNX20-202ENST00000330943 CBX3Q13185 183 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 MPP3Q13368 585 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 ITPRIPL1Q6GPH6 555 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 ZYG11AQ6WRX3 759 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 TMEM110Q86TL2 294 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 FAM131BQ86XD5 332 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 CNTD1Q8N815 330 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 DNAAF3Q8N9W5 541 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 SMYD1Q8NB12 490 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 MFSD3Q96ES6 412 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 BIRC8Q96P09 236 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PDZD7Q9H5P4 517 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 VRTNQ9H8Y1 702 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PNPLA3Q9NST1 481 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 MID2Q9UJV3 735 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 SQORQ9Y6N5 450 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 TMEM233B4DJY2 109 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 IQCF3P0C7M6 154 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PTPN9P43378 593 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 BAG6P46379 1132 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 CLCN3P51790 818 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PSME3P61289 254 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PRAMEP78395 509 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 TMEM62Q0P6H9 643 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 RALGDSQ12967 914 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 GLRA4Q5JXX5 417 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 CYP2R1Q6VVX0 501 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PID1Q7Z2X4 250 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PATL1Q86TB9 770 aaKnown RBP14.68□□□□□ -0.06
SNX20-202ENST00000330943 CLVS1Q8IUQ0 354 aaPredicted RBP14.68□□□□□ -0.06
SNX20-202ENST00000330943 MTMR14Q8NCE2 650 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 VPS39Q96JC1 886 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 DCUN1D5Q9BTE7 237 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 PLGRKTQ9HBL7 147 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 FAIMQ9NVQ4 179 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 BLOC1S6Q9UL45 172 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 KIAA1257Q9ULG3 409 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 VANGL2Q9ULK5 521 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 SH3GLB1Q9Y371 365 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.68□□□□□ -0.06
SNX20-202ENST00000330943 USP3Q9Y6I4 520 aa14.68□□□□□ -0.06
SNX20-202ENST00000330943 KCNK1O00180 336 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 PHGDHO43175 533 aaKnown RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 PDGFRBP09619 1106 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 ADSLP30566 484 aaPredicted RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 PLOD1Q02809 727 aaPredicted RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 PDAP1Q13442 181 aaKnown RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 TRIM25Q14258 630 aaKnown RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 TMEM132DQ14C87 1099 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 SOWAHAQ2M3V2 549 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 CROCCP3Q8IVE0 287 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 HERC6Q8IVU3 1022 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 FIBCD1Q8N539 461 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 PHIPQ8WWQ0 1821 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 SEPT1Q8WYJ6 367 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 LPIN3Q9BQK8 851 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 OSBPL6Q9BZF3 934 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 EBF1Q9UH73 591 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 TNFSF13BQ9Y275 285 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 LCTP09848 1927 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 ZCWPW2A0A1B0GU75 182 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 SH3PXD2BA1X283 911 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 ZBTB42B2RXF5 422 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 E7ENX8 843 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 AVPR1AP37288 418 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 MBTD1Q05BQ5 628 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 DGKDQ16760 1214 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 PKDCCQ504Y2 493 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 TREML2Q5T2D2 321 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 TP53INP2Q8IXH6 220 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 CCNYL1Q8N7R7 359 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 FAM47BQ8NA70 645 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 NLGN2Q8NFZ4 835 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 PPWD1Q96BP3 646 aaKnown RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 FAM167AQ96KS9 214 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 TSNARE1Q96NA8 513 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 RANBP9Q96S59 729 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 PRDM12Q9H4Q4 367 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 TMPRSS4Q9NRS4 437 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 IARS2Q9NSE4 1012 aaKnown RBP14.67□□□□□ -0.06
SNX20-202ENST00000330943 VTI1BQ9UEU0 232 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 TLK1Q9UKI8 766 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 PCDHGA7Q9Y5G6 932 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 SCN4AP35499 1836 aa14.67□□□□□ -0.06
SNX20-202ENST00000330943 CCDC78A2IDD5 438 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms