RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 PRMT5O14744 637 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 APOC2P02655 101 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 PCNAP12004 261 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 C10orf120Q5SQS8 335 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 CRTC3Q6UUV7 619 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 POMGNT2Q8NAT1 580 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 FCGR1BQ92637 280 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 NEDD4LQ96PU5 975 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 OVOS2A0A0J9YW53 1432 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 OVOS2Q6IE36 1432 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 LYNP07948 512 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 PDCD4Q53EL6 469 aaKnown RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 ADCY4Q8NFM4 1077 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 FAR1Q8WVX9 515 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 EZH1Q92800 747 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 TEFMQ96QE5 360 aaKnown RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 POLD4Q9HCU8 107 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 SYNPO2Q9UMS6 1093 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 BTNL10A8MVZ5 291 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 HIST1H2ABP04908 130 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 PEPDP12955 493 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 UGT1A5P35504 534 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 FOLH1Q04609 750 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 EIF5AL1Q6IS14 154 aaKnown RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 HIST3H2AQ7L7L0 130 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 HIPK1Q86Z02 1210 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 C10orf107Q8IVU9 208 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 GPALPP1Q8IXQ4 340 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 C12orf56Q8IXR9 622 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 HIST1H2ACQ93077 130 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 TRMOQ9BU70 441 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 E2F8A0AVK6 867 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 PAGE2Q7Z2X7 111 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 RAD18Q9NS91 495 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 PSME2Q9UL46 239 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 EPB42P16452 691 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 ZNF7P17097 686 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 CXCR2P25025 360 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 NAMPTP43490 491 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 TMEM132BQ14DG7 1078 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 ARHGAP36Q6ZRI8 547 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 TMEM159Q96B96 161 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 ZNF607Q96SK3 696 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 LRRC4BQ9NT99 713 aa14.47□□□□□ -0.09
COL7A1-201ENST00000328333 TRNAU1APQ9NX07 287 aaKnown RBP14.47□□□□□ -0.09
COL7A1-201ENST00000328333 SNX4O95219 450 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 PLEKP08567 350 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 MTX3Q5HYI7 312 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 HERC6Q8IVU3 1022 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 BTBD9Q96Q07 612 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 CITED4Q96RK1 184 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 MTMR4Q9NYA4 1195 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 NMT2O60551 498 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 NPR2P20594 1047 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 NTSP30990 170 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 GLB1LQ6UWU2 654 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SLCO6A1Q86UG4 719 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 ZFP28Q8NHY6 868 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 MASTLQ96GX5 879 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 IFT80Q9P2H3 777 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 VDRP11473 427 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 TAF5Q15542 800 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 DALRD3Q5D0E6 543 aaKnown RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 TMPRSS11AQ6ZMR5 421 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 WDR48Q8TAF3 677 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SLAIN2Q9P270 581 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 ITGA11Q9UKX5 1188 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SNX3O60493 162 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 DDX39BQ13838 428 aaKnown RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SRBD1Q8N5C6 995 aaKnown RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 YIPF2Q9BWQ6 316 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SNX6Q9UNH7 406 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 COL15A1P39059 1388 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 KCNQ3O43525 872 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SERPINB7O75635 380 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 CBX6O95503 412 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SLC2A4P14672 509 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 ARFIP1P53367 373 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SPOCD1Q6ZMY3 1216 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 ZNF655Q8N720 491 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 NKX2-3Q8TAU0 364 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 WRNIP1Q96S55 665 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 MND1Q9BWT6 205 aa14.46□□□□□ -0.09
COL7A1-201ENST00000328333 SENP6Q9GZR1 1112 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-201ENST00000328333 NCF1BA6NI72 391 aaPredicted RBP14.46□□□□□ -0.1
COL7A1-201ENST00000328333 NCF1CA8MVU1 366 aaPredicted RBP14.46□□□□□ -0.1
COL7A1-201ENST00000328333 NCF1P14598 390 aaPredicted RBP14.46□□□□□ -0.1
COL7A1-201ENST00000328333 S100A2P29034 98 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 GCNT1Q02742 428 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 TEX47Q8TBZ9 253 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 BHMTQ93088 406 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 NACC2Q96BF6 587 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 PPP2R3BQ9Y5P8 575 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 USP46P62068 366 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 ZMYND11Q15326 602 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 XKRXQ6PP77 449 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 FAM196AQ6ZSG2 479 aa14.46□□□□□ -0.1
COL7A1-201ENST00000328333 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
COL7A1-201ENST00000328333 OGTO15294 1046 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms