RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CDC25AP30304 524 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ADSLP30566 484 aaPredicted RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 DNAJA1P31689 397 aaKnown RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 TUBP50607 506 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 IST1P53990 364 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 NCKAP1LP55160 1127 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 FKBP3Q00688 224 aaKnown RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 PPP2R5AQ15172 486 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 KRT31Q15323 416 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 CFAP221Q4G0U5 840 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 GPBP1Q86WP2 473 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 TRIM69Q86WT6 500 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 CACUL1Q86Y37 369 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ACBD4Q8NC06 268 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 MCPH1Q8NEM0 835 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 PDZD8Q8NEN9 1154 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 WFIKKN2Q8TEU8 576 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 SYN2Q92777 582 aaPredicted RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 SLC2A11Q9BYW1 496 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 SYNDIG1Q9H7V2 258 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 DMAC2Q9NW81 257 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 OAS3Q9Y6K5 1087 aaKnown RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 NUMA1Q14980 2115 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 GOLGA6L9A6NEM1 432 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 H0YCG3 227 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 HGSO14964 777 aaPredicted RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ATP1A3P13637 1013 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 MAPK7Q13164 816 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 SETMARQ53H47 684 aaPredicted RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ANKRD40Q6AI12 368 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 NCAPH2Q6IBW4 605 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 CNGA4Q8IV77 575 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 ZNF548Q8NEK5 533 aaPredicted RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 RASSF8Q8NHQ8 419 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 GANCQ8TET4 914 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 RANBP9Q96S59 729 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 TREX2Q9BQ50 279 aaPredicted RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 SAMSN1Q9NSI8 373 aaKnown RBP6.87□□□□□ -1.31
CSTF3-201ENST00000323959 FBXL12Q9NXK8 326 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 CYTH4Q9UIA0 394 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 KCND3Q9UK17 655 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 KNL1Q8NG31 2342 aa6.87□□□□□ -1.31
CSTF3-201ENST00000323959 E9PMD0 336 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 KIAA0391O15091 583 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SLC7A4O43246 635 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 NRDCO43847 1150 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CALUO43852 315 aaPredicted RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 RNASEH1O60930 286 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SERPINC1P01008 464 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 AGAP20933 346 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ANXA13P27216 316 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 NAMPTP43490 491 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 GTF2BQ00403 316 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 POU5F1Q01860 360 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PCOLCEQ15113 449 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 MEA1Q16626 185 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 MAN2A1Q16706 1144 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 DDR2Q16832 855 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PDLIM3Q53GG5 364 aaPredicted RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CCDC186Q7Z3E2 898 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 STKLD1Q8NE28 680 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 DYDC2Q96IM9 177 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 TEFMQ96QE5 360 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 DNAJC7Q99615 494 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 REEP2Q9BRK0 252 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 LXNQ9BS40 222 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 NUCKS1Q9H1E3 243 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 LRRN3Q9H3W5 708 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 METTL14Q9HCE5 456 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 EDARQ9UNE0 448 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ZSCAN5CA6NGD5 496 aaPredicted RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PENKP01210 267 aaPredicted RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PIGRP01833 764 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 STAT1P42224 750 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 RARRES1P49788 294 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PPP2R2BQ00005 443 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ZBTB6Q15916 424 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 KNOP1Q1ED39 458 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SDHAF4Q5VUM1 108 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SLC6A19Q695T7 634 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ESRP1Q6NXG1 681 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SND1Q7KZF4 910 aaKnown RBP eCLIP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 NLGN4XQ8N0W4 816 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 NLGN4YQ8NFZ3 816 aaPredicted RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CACTINQ8WUQ7 758 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SECISBP2Q96T21 854 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PARVGQ9HBI0 331 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 MRPL40Q9NQ50 206 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PRSS16Q9NQE7 514 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PADI4Q9UM07 663 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CAPN11Q9UMQ6 739 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PCDHB3Q9Y5E6 796 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 P4HA2O15460 535 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 GOT1P17174 413 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CASP1P29466 404 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PMS1P54277 932 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 LILRA4P59901 499 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ARID5AQ03989 594 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms