RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ICAM3P32942 547 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 RBBP7Q16576 425 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 C6orf10Q5SRN2 563 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 STRADAQ7RTN6 431 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 PLPPR4Q7Z2D5 763 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ADGRG6Q86SQ4 1221 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 CROCCP3Q8IVE0 287 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC22A9Q8IVM8 553 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 SUPT3HB4E1H0 165 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 INPP4BO15327 924 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 CRTAMO95727 393 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ATP5F1P24539 256 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 PTPN9P43378 593 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 TSPY1Q01534 308 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 NFYCQ13952 458 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 EML3Q32P44 896 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ARMC3Q5W041 872 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 CAMK1DQ8IU85 385 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 EDEM1Q92611 657 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 AZIN2Q96A70 460 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 USP29Q9HBJ7 922 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ZNF214Q9UL59 606 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 H3BRB1 525 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 TP73O15350 636 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ZNF286BP0CG31 522 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 FCGR1AP12314 374 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 HNRNPLP14866 589 aaKnown RBP eCLIP12.94□□□□□ -0.342e-11■■■■□ 20.2
DNMT3A-202ENST00000321117 AKAP5P24588 427 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 ATXN1P54253 815 aaKnown RBP12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 DLG2Q15700 870 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 FRA10AC1Q70Z53 315 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 PYROXD2Q8N2H3 581 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 SHCBP1Q8NEM2 672 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 MFSD3Q96ES6 412 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 RHOJQ9H4E5 214 aa12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
DNMT3A-202ENST00000321117 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TK2O00142 265 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TMED10P49755 219 aaKnown RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 THOP1P52888 689 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 MRPS5P82675 430 aaKnown RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 SP2Q02086 613 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 FRG1Q14331 258 aaKnown RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 NADK2Q4G0N4 442 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 STXBP5Q5T5C0 1151 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC27A1Q6PCB7 646 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TIFABQ6ZNK6 161 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 SLC26A9Q7LBE3 791 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 EGFL6Q8IUX8 553 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TMEM192Q8IY95 271 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 THEM5Q8N1Q8 247 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 MYO1HQ8N1T3 1032 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 SPATA6LQ8N4H0 392 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CCDC185Q8N715 623 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 ZNF555Q8NEP9 628 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 GBA2Q9HCG7 927 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 ARHGEF4Q9NR80 690 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 RBM22Q9NW64 420 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■□□□□ 11.1
DNMT3A-202ENST00000321117 KANSL3Q9P2N6 904 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 KDM1AO60341 852 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 PCSK1P29120 753 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 RAB10P61026 200 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 SQLEQ14534 574 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 NEDD8Q15843 81 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 GK5Q6ZS86 529 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TERB1Q8NA31 727 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 C9orf16Q9BUW7 83 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 SEPT3Q9UH03 358 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TBC1D4O60343 1298 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 FGF3P11487 239 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 XRCC1P18887 633 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 NFKBIAP25963 317 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CTBP1Q13363 440 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 MSLNQ13421 630 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 PCLAFQ15004 111 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 PCID2Q5JVF3 399 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 ZNF567Q8N184 647 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 PQLC3Q8N755 202 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 FAM156AQ8NDB6 213 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 OR52B2Q96RD2 323 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 OSMRQ99650 979 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 CIB1Q99828 191 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 MKS1Q9NXB0 559 aa12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 RCOR3Q9P2K3 495 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-202ENST00000321117 COL4A1P02462 1669 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms