RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SEL1L3Q68CR1 1132 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 KRT80Q6KB66 452 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 TIGD7Q6NT04 549 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-201ENST00000321105 PACS1Q6VY07 963 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 TMEM110Q86TL2 294 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 ECHDC2Q86YB7 292 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 GKN1Q9NS71 199 aa11.19□□□□□ -0.62
TOP3A-201ENST00000321105 GSTA4O15217 222 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 PRKCGP05129 697 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 C2P06681 752 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 CYP3A5P20815 502 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 GPX6P59796 221 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 PTP4A2Q12974 167 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 TEX44Q53QW1 395 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 ESRP1Q6NXG1 681 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 RHBDF2Q6PJF5 856 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 RBM23Q86U06 439 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 OR7D4Q8NG98 312 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SYT11Q9BT88 431 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 DNAJB4Q9UDY4 337 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SLC4A7Q9Y6M7 1214 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 C2orf81A6NN90 581 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 EEF1B2P24534 225 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 KLRC2P26717 231 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 AP2B1P63010 937 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 MPP1Q00013 466 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 DSC2Q02487 901 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 CAPRIN1Q14444 709 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 CYTH1Q15438 398 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 AGAP9Q5VTM2 703 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 GPRIN1Q7Z2K8 1008 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 CCNJLQ8IV13 435 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SPDYE1Q8NFV5 336 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SMOQ99835 787 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 TBC1D10AQ9BXI6 508 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SNX15Q9NRS6 342 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 RNF112Q9ULX5 631 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 ITGB1P05556 798 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 ZCCHC18P0CG32 403 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 HMOX2P30519 316 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 ARHGAP18Q8N392 663 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SLC44A1Q8WWI5 657 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
TOP3A-201ENST00000321105 TCF7L2Q9NQB0 619 aa11.18□□□□□ -0.62
TOP3A-201ENST00000321105 SF3B1O75533 1304 aaKnown RBP eCLIP11.18□□□□□ -0.625e-6■■■■■ 131.4
TOP3A-201ENST00000321105 MYH9P35579 1960 aaKnown RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 C9JVG2 144 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PSMD3O43242 534 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 ACRP10323 421 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PBLDP30039 288 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PPARGP37231 505 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 SIX1Q15475 284 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PQLC3Q8N755 202 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 CLPTM1LQ96KA5 538 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 SCOCQ9UIL1 159 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 TRHDEQ9UKU6 1024 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 BAG5Q9UL15 447 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PCDHGC4Q9Y5F7 938 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 HACD1B0YJ81 288 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 ANGPT2O15123 496 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 EDF1O60869 148 aaKnown RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 ATP6V1G2O95670 118 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 GJA1P17302 382 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 NMBRP28336 390 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 KLF1Q13351 362 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PFKFB4Q16877 469 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 AGKQ53H12 422 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 NAT8LQ8N9F0 302 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 GRIN3AQ8TCU5 1115 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PSMG2Q969U7 264 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 CMTM5Q96DZ9 223 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 HBEGFQ99075 208 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 XPR1Q9UBH6 696 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 TRMT6Q9UJA5 497 aaKnown RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 FBXO5Q9UKT4 447 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PCDHB9Q9Y5E1 797 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 H7C4K7 107 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 SERPINE1P05121 402 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 SERPINH1P50454 418 aaKnown RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 RPS24P62847 133 aaKnown RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 POU4F1Q01851 419 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 KPNB1Q14974 876 aaKnown RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 MFSD5Q6N075 450 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 DPY19L2P1Q6NXN4 242 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 DNAJC14Q6Y2X3 702 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-201ENST00000321105 AGMOQ6ZNB7 445 aa11.17□□□□□ -0.62
TOP3A-201ENST00000321105 GLT6D1Q7Z4J2 308 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms