RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 KRT10P13645 584 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ALADP13716 330 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 MCM3P25205 808 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 CORO1AP31146 461 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 STIP1P31948 543 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 NOP2P46087 812 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RGS7P49802 495 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TPI1P60174 286 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ZP2Q05996 745 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 NSUN2Q08J23 767 aaKnown RBP eCLIP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 GALNT2Q10471 571 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RSPO4Q2I0M5 234 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PIK3R6Q5UE93 754 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 GRAMD4Q6IC98 578 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SPOCD1Q6ZMY3 1216 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RFX8Q6ZV50 586 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 CYP4V2Q6ZWL3 525 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ANKS1BQ7Z6G8 1248 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PCGF5Q86SE9 256 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ETFBKMTQ8IXQ9 262 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TTC9BQ8N6N2 239 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 IL22RA1Q8N6P7 574 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 MAB21L3Q8N8X9 362 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SCAMP5Q8TAC9 235 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SH3RF2Q8TEC5 729 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 NSMCE1Q8WV22 266 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SPACA7Q96KW9 195 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 B3GALT6Q96L58 329 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RNF157Q96PX1 679 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ASB2Q96Q27 587 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SNRNP25Q9BV90 132 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ACE2Q9BYF1 805 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 POMKQ9H5K3 350 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PCDH18Q9HCL0 1135 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RAD18Q9NS91 495 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 DUS2Q9NX74 493 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ZNF212Q9UDV6 495 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SUN2Q9UH99 717 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RIMKLBQ9ULI2 386 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 NEU3Q9UQ49 428 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 MFHAS1Q9Y4C4 1052 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SHROOM3Q8TF72 1996 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 hCG_1818297A0A087WSY0 165 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TSPAN11A1L157 253 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 C3orf70A6NLC5 250 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 HEPACAM2A8MVW5 462 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 E9PAM4 449 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TGFBR3LH3BV60 316 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PGRMC1O00264 195 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TULP2O00295 520 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 MMP20O60882 483 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PAGE1O75459 146 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 APODP05090 189 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ITGAVP06756 1048 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PNMA6AP0CW24 399 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TSHRP16473 764 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 COMTP21964 271 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 CHRNA3P32297 505 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 GRIA2P42262 883 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 GPR15P49685 360 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 CAV1Q03135 178 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 EFEMP1Q12805 493 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 KLF1Q13351 362 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RUNX3Q13761 415 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 DPYSL3Q14195 570 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 KRT81Q14533 505 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 CCNG2Q16589 344 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 P3H1Q32P28 736 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM133BQ5BKY9 247 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM78AQ5JUQ0 283 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SAMD5Q5TGI4 173 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 SCARA3Q6AZY7 606 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ITPRIPL1Q6GPH6 555 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 RETSATQ6NUM9 610 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ATCAYQ86WG3 371 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TEX26Q8N6G2 289 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PCDH20Q8N6Y1 951 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ACRBPQ8NEB7 543 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 KIF18AQ8NI77 898 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 JOSD2Q8TAC2 188 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ASB12Q8WXK4 309 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM131CQ96AQ9 280 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 OLFM3Q96PB7 478 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 QKIQ96PU8 341 aaKnown RBP eCLIP3.37□□□□□ -1.871e-8■■■■■ 29.1
SCAMP1-201ENST00000320280 MAK16Q9BXY0 300 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 TKTL2Q9H0I9 626 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 LRRC19Q9H756 370 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ZDHHC4Q9NPG8 344 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 VPS45Q9NRW7 570 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PIGVQ9NUD9 493 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 OSER1Q9NX31 292 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 AGO1Q9UL18 857 aaKnown RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 NAALADL1Q9UQQ1 740 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 HS3ST2Q9Y278 367 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 PLXNA2O75051 1894 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 GOLGA8SH3BPF8 625 aa3.37□□□□□ -1.87
SCAMP1-201ENST00000320280 HCRTO43612 131 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms