RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FOXN2P32314 431 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 MAGEA6P43360 314 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 RPL26P61254 145 aaKnown RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 SLC44A4Q53GD3 710 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CAPN12Q6ZSI9 719 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CENPUQ71F23 418 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 PIP4K2CQ8TBX8 421 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 TMEM175Q9BSA9 504 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 BTBD10Q9BSF8 475 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CADM1Q9BY67 442 aaKnown RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 WDCPQ9H6R7 721 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 KCNK9Q9NPC2 374 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ZDHHC7Q9NXF8 308 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 SFMBT1Q9UHJ3 866 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 NUP205Q92621 2012 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 PTPRSQ13332 1948 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 MTMR11A4FU01 709 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CHADO15335 359 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 GSC2O15499 205 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ADAM12O43184 909 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 KRT36O76013 467 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 F9P00740 461 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ZCCHC18P0CG32 403 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CREB1P16220 341 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 MAGEA11P43364 429 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CLCN2P51788 898 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ARL4CP56559 192 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 SESN3P58005 492 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 NFE2Q16621 373 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 DUS1LQ6P1R4 473 aaKnown RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 C3orf62Q6ZUJ4 267 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ACAD11Q709F0 780 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ZNF534Q76KX8 674 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 KBTBD2Q8IY47 623 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 MIPEPQ99797 713 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 PRDM12Q9H4Q4 367 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CWH43Q9H720 699 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ABCC13Q9NSE7 274 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 IL37Q9NZH6 218 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 PCDHB5Q9Y5E4 795 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 SHROOM3Q8TF72 1996 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 MYO18AQ92614 2054 aaKnown RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 C2CD2LO14523 706 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 NDC80O14777 642 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 HOXA2O43364 376 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 AP1G1O43747 822 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 AVILO75366 819 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 LRIG2O94898 1065 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 ITGB8P26012 769 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SSTR1P30872 391 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 HCAR3P49019 387 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 ARPP19P56211 112 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 CBLBQ13191 982 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 RNF19BQ6ZMZ0 732 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 TMCO2Q7Z6W1 182 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 CAND1Q86VP6 1230 aaKnown RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SCUBE1Q8IWY4 988 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 TFB1MQ8WVM0 346 aaKnown RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 HTR3CQ8WXA8 447 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 MPP4Q96JB8 637 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 DDX50Q9BQ39 737 aaKnown RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 MRPL9Q9BYD2 267 aaKnown RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SMOC2Q9H3U7 446 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SCML2Q9UQR0 700 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SSX2IPQ9Y2D8 614 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 HACD1B0YJ81 288 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 TROVE2P10155 538 aaKnown RBP eCLIP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
CPNE1-201ENST00000317677 TPI1P60174 286 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 DSG1Q02413 1049 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 SPIDRQ14159 915 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 STAT4Q14765 748 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 EFTUD2Q15029 972 aaKnown RBP eCLIP13.31□□□□□ -0.286e-8■■■■□ 26.4
CPNE1-201ENST00000317677 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 BTBD8Q5XKL5 378 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 RFWD3Q6PCD5 774 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 B3GNT6Q6ZMB0 384 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 ANKRD42Q8N9B4 389 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 GDAP1Q8TB36 358 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 C10orf82Q8WW14 230 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 STMN2Q93045 179 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 P2RY11Q96G91 374 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 ECSITQ9BQ95 431 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 KLC2Q9H0B6 622 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 PLAC1Q9HBJ0 212 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms