RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 RBM47A0AV96 593 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM150BA6NC51 233 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CFAP99D6REC4 459 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZMPSTE24O75844 475 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 VARSP26640 1264 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 HOXD12P35452 270 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MAGEA10P43363 369 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ATP4BP51164 291 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SLC12A2P55011 1212 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CCNYL2Q5T2Q4 361 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 IL23RQ5VWK5 629 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM135Q86UB9 458 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SLC7A14Q8TBB6 771 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 LPGAT1Q92604 370 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 USP13Q92995 863 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MASTLQ96GX5 879 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 HEXIM2Q96MH2 286 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SNRNP25Q9BV90 132 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF385DQ9H6B1 395 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TASP1Q9H6P5 420 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 RNF146Q9NTX7 359 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 FBXO28Q9NVF7 368 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SARDHQ9UL12 918 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NDUFAF1Q9Y375 327 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PTPRJQ12913 1337 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM43BA6NCK2 446 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM64BA6NI03 449 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SPDYE16A6NNV3 312 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 JAK1P23458 1154 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ASPAP45381 313 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MERTKQ12866 999 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SLC12A1Q13621 1099 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 HSDL1Q3SXM5 330 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SLC9B1Q4ZJI4 515 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GADL1Q6ZQY3 521 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SLC26A9Q7LBE3 791 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 STRA8Q7Z7C7 330 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 HERC6Q8IVU3 1022 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PPP1R2P1Q96PQ5 205 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 RNPEPQ9H4A4 650 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 WDR55Q9H6Y2 383 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TRHDEQ9UKU6 1024 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ERGIC3Q9Y282 383 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 G3V2L1 256 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A9O60656 530 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 KRT19P08727 400 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 RBP1P09455 135 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 UMPSP11172 480 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 IL4RP24394 825 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PFKPQ01813 784 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NPNTQ6UXI9 565 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 FAM83AQ86UY5 434 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ASB2Q96Q27 587 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NT5C1AQ9BXI3 368 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 RPF1Q9H9Y2 349 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A7Q9HAW7 530 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A10Q9HAW8 530 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A8Q9HAW9 530 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SMPD3Q9NY59 655 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 AP4E1Q9UPM8 1137 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 A0A1W2PPW3 197 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 C7orf72A4D263 438 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CST3P01034 146 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PRKCBP05771 671 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SNRPB2P08579 225 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 JUNBP17275 347 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ACADSBP45954 432 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PRKCQQ04759 706 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 FOXM1Q08050 763 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF846Q147U1 533 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BCL2A1Q16548 175 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BROXQ5VW32 411 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 EGFLAMQ63HQ2 1017 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NAPEPLDQ6IQ20 393 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MPZL3Q6UWV2 235 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 LYSMD3Q7Z3D4 306 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TBC1D15Q8TC07 691 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 URGCPQ8TCY9 931 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 FAM84AQ96KN4 292 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TRPC7Q9HCX4 862 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MTMR10Q9NXD2 777 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 COPG1Q9Y678 874 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 H0YAE9 185 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CLPXO76031 633 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 KCNA2P16389 499 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GRIA4P48058 902 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 RBP5P82980 135 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 INCA1Q0VD86 236 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM132AQ24JP5 1023 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 KIZQ2M2Z5 673 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 LINC00523Q86TU6 105 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CCNYL1Q8N7R7 359 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 DNAAF3Q8N9W5 541 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 KDM1BQ8NB78 822 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BEST2Q8NFU1 509 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MAPK15Q8TD08 544 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM143Q96AN5 459 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF341Q9BYN7 854 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ANKHQ9HCJ1 492 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms