RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 EIF3DO15371 548 aaKnown RBP eCLIP8.85□□□□□ -0.99
USF3-201ENST00000316407 CD83Q01151 205 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SPOCD1Q6ZMY3 1216 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 DLG3Q92796 817 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 APBA2Q99767 749 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 WDCPQ9H6R7 721 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 HPF1Q9NWY4 346 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 PCDHA10Q9Y5I2 948 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ADCY10Q96PN6 1610 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 MDM4O15151 490 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ANXA9O76027 345 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 METTL18O95568 372 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 HARS2P49590 506 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 PRKCEQ02156 737 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 PEX6Q13608 980 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ARHGAP27Q6ZUM4 889 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TTYH1Q9H313 450 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 CDHR5Q9HBB8 845 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 XPNPEP3Q9NQH7 507 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ARHGEF33A8MVX0 844 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 RTP1P59025 263 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TXNDC11Q6PKC3 985 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TNKS2Q9H2K2 1166 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TMEM114B3SHH9 223 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CHURC1-FNTBB4DL54 471 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 NTRK1P04629 796 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ATP5F1P24539 256 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 RPL14P50914 215 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 EFNA5P52803 228 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 PPP2R2BQ00005 443 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 PLET1Q6UQ28 207 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 FRMD7Q6ZUT3 714 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 FAM131BQ86XD5 332 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CREG2Q8IUH2 290 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 NPAS2Q99743 824 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 LRRC40Q9H9A6 602 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 GRHL1Q9NZI5 618 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 HIRAP54198 1017 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 BAP1Q92560 729 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TUBGCP5Q96RT8 1024 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 FKBP14Q9NWM8 211 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 STX16-NPEPL1H3BU86 382 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 PSMD9O00233 223 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 STX16O14662 325 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 MAP2K7O14733 419 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CD3EAPO15446 510 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 GMFBP60983 142 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SPIBQ01892 262 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 ATF7IP2Q5U623 682 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TBC1D21Q8IYX1 336 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CBWD1Q9BRT8 395 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TLR10Q9BXR5 811 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 SAMHD1Q9Y3Z3 626 aaKnown RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 ATP13A5Q4VNC0 1218 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 DEF8Q6ZN54 512 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 CCNJLQ8IV13 435 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 EFHD2Q96C19 240 aaPredicted RBP8.85□□□□□ -0.99
USF3-201ENST00000316407 KLK14Q9P0G3 267 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 TMCO1Q9UM00 188 aa8.85□□□□□ -0.99
USF3-201ENST00000316407 LINC00032P0C843 101 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SMCO1Q147U7 214 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 MIB1Q86YT6 1006 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SFRP1Q8N474 314 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 RCN3Q96D15 328 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ALDH1A2O94788 518 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 MXD1Q05195 221 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 FBXO42Q6P3S6 717 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 CDK20Q8IZL9 346 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PPP1R13LQ8WUF5 828 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 FRMD8Q9BZ67 464 aaPredicted RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 ENOPH1Q9UHY7 261 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SLCO1B7G3V0H7 640 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PRH1P02810 166 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 WEE1P30291 646 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 TNFAIP8L1Q8WVP5 186 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 GPRC5CQ9NQ84 441 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 CNOT7Q9UIV1 285 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 BTRCQ9Y297 605 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 A0A096LPK6 155 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PRRG1O14668 218 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SWI5Q1ZZU3 235 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ANKS6Q68DC2 871 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 LRRN4Q8WUT4 740 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 A0A087WZ62 844 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PSME3P61289 254 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SKIV2LQ15477 1246 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 ATL1Q8WXF7 558 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 TOP1MTQ969P6 601 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SEMA6BQ9H3T3 888 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ALG9Q9H6U8 611 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ZNF335Q9H4Z2 1342 aaPredicted RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 SERPINA3P01011 423 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 BOP1Q14137 746 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 OGFRL1Q5TC84 451 aaPredicted RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 ZCCHC8Q6NZY4 707 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 ZNF677Q86XU0 584 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 COLGALT1Q8NBJ5 622 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms