RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TBC1D30Q9Y2I9 924 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
TPM3-203ENST00000312970 HS3ST4Q9Y661 456 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 HECTD1Q9ULT8 2610 aa8.37□□□□□ -1.07
TPM3-203ENST00000312970 GOLGA4Q13439 2230 aaKnown RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 A0A1W2PR77 199 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 C1QTNF3-AMACRE9PGA6 284 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 WNT9AO14904 365 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ALOX15BO15296 676 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 YKT6O15498 198 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 SLC7A4O43246 635 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 LATO43561 262 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 DAB1O75553 588 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ADCY5O95622 1261 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ITGAVP06756 1048 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 NUDT1P36639 197 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 GABRB2P47870 512 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ARRB1P49407 418 aaPredicted RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 CXCR3P49682 368 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 KRT83P78385 493 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 IL9RQ01113 521 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 CENPCQ03188 943 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 CCDC15Q0P6D6 951 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ZNF211Q13398 564 aaPredicted RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 PTPN20Q4JDL3 420 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 VWA3BQ502W6 1294 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 BRMS1LQ5PSV4 323 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ACBD5Q5T8D3 534 aaPredicted RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 LRRC31Q6UY01 552 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 C14orf80Q86SX3 495 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ERICH1Q86X53 443 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 GATAD2AQ86YP4 633 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 SH2D3CQ8N5H7 860 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 MFSD2AQ8NA29 543 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 OR52K2Q8NGK3 314 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 SAP25Q8TEE9 199 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 HNRNPLLQ8WVV9 542 aaKnown RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 NT5C3BQ969T7 300 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 FAM131CQ96AQ9 280 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 C18orf8Q96DM3 657 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 PGAP3Q96FM1 320 aaPredicted RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 NPY6RQ99463 290 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 TKTL2Q9H0I9 626 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 MUC3BQ9H195 1237 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ERVMER34-1Q9H9K5 563 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 PLCB1Q9NQ66 1216 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 GDF3Q9NR23 364 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 PIGVQ9NUD9 493 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ARHGEF38Q9NXL2 777 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ARHGAP20Q9P2F6 1191 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 FTSJ1Q9UET6 329 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 AJAP1Q9UKB5 411 aaPredicted RBP8.36□□□□□ -1.07
TPM3-203ENST00000312970 SARDHQ9UL12 918 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 PPM1HQ9ULR3 514 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 STAP1Q9ULZ2 295 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 PAXBP1Q9Y5B6 917 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 OR51B4Q9Y5P0 310 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 ATMQ13315 3056 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 MGAQ8IWI9 3026 aa8.36□□□□□ -1.07
TPM3-203ENST00000312970 PLXNA2O75051 1894 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 TRABD2BA6NFA1 517 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DRGXA6NNA5 263 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PLK4O00444 970 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PLRG1O43660 514 aaKnown RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 MAGEC1O60732 1142 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 RTN2O75298 545 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 CNTN5O94779 1100 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 LDOC1O95751 146 aaPredicted RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 C1SP09871 688 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PNMA6AP0CW24 399 aaPredicted RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 CDK4P11802 303 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 CYP11B1P15538 503 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 CDH5P33151 784 aaPredicted RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 GCGRP47871 477 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 RXRGP48443 463 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 SULT1E1P49888 294 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 IRAK1P51617 712 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 METAP1P53582 386 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 NXPH1P58417 271 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DEUP1Q05D60 604 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 CNTN1Q12860 1018 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 OVGP1Q12889 678 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 BNIP3Q12983 259 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 RAPGEF1Q13905 1077 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 STAT4Q14765 748 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DRAP1Q14919 205 aaPredicted RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 SHBQ15464 509 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 SMAD1Q15797 465 aaKnown RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 SLC25A52Q3SY17 297 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 CCDC157Q569K6 752 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 MIIPQ5JXC2 388 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 KLHDC7AQ5VTJ3 777 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 NAPEPLDQ6IQ20 393 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DPY19L2P1Q6NXN4 242 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 SETD3Q86TU7 594 aaPredicted RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 NOP9Q86U38 636 aaKnown RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 IQCHQ86VS3 1027 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms