RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 CLK4Q9HAZ1 481 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 NEK6Q9HC98 313 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 MAN1C1Q9NR34 630 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PSMD13Q9UNM6 376 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 TTLL3Q9Y4R7 772 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PCDHGA8Q9Y5G5 932 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 NEMP1O14524 444 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 DNAJA2O60884 412 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SFNP31947 248 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SERPINH1P50454 418 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 MYL6P60660 151 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 LSM3P62310 102 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PLEKHG4Q58EX7 1191 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 IQSEC1Q6DN90 963 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 GPAT2Q6NUI2 795 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 ITIH5Q86UX2 942 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 KATNAL2Q8IYT4 538 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 BPIFB6Q8NFQ5 453 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 VPS45Q9NRW7 570 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 GMIPQ9P107 970 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 DNAJB4Q9UDY4 337 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 ACTL7BQ9Y614 415 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 H3BUI4 141 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 MTSS1O43312 755 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 STBD1O95210 358 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 BMXP51813 675 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SNAP47Q5SQN1 464 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 GALNT7Q86SF2 657 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SLC7A3Q8WY07 619 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 VPS39Q96JC1 886 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 BBS2Q9BXC9 721 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 TLE6Q9H808 572 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 MRPL47Q9HD33 250 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 KAT6AQ92794 2004 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 VWA5AO00534 786 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PSTPIP1O43586 416 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 H6PDO95479 791 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SERPINB5P36952 375 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 TFAMQ00059 246 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PTP4A2Q12974 167 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SNX29P2Q8IUI4 249 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 EXD1Q8NHP7 514 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 TFAP2BQ92481 460 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 EFHD2Q96C19 240 aaPredicted RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PTCD3Q96EY7 689 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 ACAT2Q9BWD1 397 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 MOV10Q9HCE1 1003 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 KIAA1257Q9ULG3 409 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 POMPQ9Y244 141 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 IFT52Q9Y366 437 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 H3BNX3 289 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 KMOO15229 486 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 AVILO75366 819 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 CSDE1O75534 798 aaKnown RBP10.63□□□□□ -0.71
MSRB3-201ENST00000308259 GSNP06396 782 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 GJB1P08034 283 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 GLRA2P23416 452 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 WEE1P30291 646 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 GPX6P59796 221 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PTK7Q13308 1070 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 C15orf39Q6ZRI6 1047 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 VSIG10LQ86VR7 867 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SAMD14Q8IZD0 417 aaPredicted RBP10.63□□□□□ -0.71
MSRB3-201ENST00000308259 BHLHE22Q8NFJ8 381 aaPredicted RBP10.63□□□□□ -0.71
MSRB3-201ENST00000308259 HSPH1Q92598 858 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 CDRT15Q96T59 188 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SNTG2Q9NY99 539 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SLC9A2Q9UBY0 812 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 LGALS13Q9UHV8 139 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SQORQ9Y6N5 450 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PHGDHO43175 533 aaKnown RBP10.63□□□□□ -0.71
MSRB3-201ENST00000308259 DGAT1O75907 488 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 CALB1P05937 261 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 RAB6CQ53S08 254 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 FGD3Q5JSP0 725 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SYDE1Q6ZW31 735 aaPredicted RBP10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PLEKHH3Q7Z736 793 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 ACTL9Q8TC94 416 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 ACMSDQ8TDX5 336 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 MECRQ9BV79 373 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 RAB6CQ9H0N0 254 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PNPLA3Q9NST1 481 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SYBUQ9NX95 663 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 ARHGAP28Q9P2N2 729 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 F5H423 210 aaPredicted RBP10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PMM2O15305 246 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 TOMM70O94826 608 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 KRT19P08727 400 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 SMIM18P0DKX4 95 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 ZNF23P17027 643 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PTPRAP18433 802 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 CDH8P55286 799 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 KLHL38Q2WGJ6 581 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 PAGE2BQ5JRK9 111 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 CPNE9Q8IYJ1 553 aa10.63□□□□□ -0.71
MSRB3-201ENST00000308259 FAM71DQ8N9W8 422 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms