RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CRABP2P29373 138 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 CASKIN2Q8WXE0 1202 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 WRAP53Q9BUR4 548 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 DNAJC18Q9H819 358 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 C10orf88Q9H8K7 445 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 AVENQ9NQS1 362 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 MYH10P35580 1976 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 FSBPO95073 299 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PIRTP0C851 137 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SERPINB5P36952 375 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 GRM3Q14832 879 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PARP6Q2NL67 630 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 AASDHQ4L235 1098 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM9CQ8IZT9 166 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 COL26A1Q96A83 441 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SGSM3Q96HU1 749 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SEC24DO94855 1032 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM107AO95990 144 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 KRT6AP02538 564 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 KRT6BP04259 564 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 TIE1P35590 1138 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 KRT6CP48668 564 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PURAQ00577 322 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 AAK1Q2M2I8 961 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ARSHQ5FYA8 562 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ATAD3BQ5T9A4 648 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 RFWD3Q6PCD5 774 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 CCNI2Q6ZMN8 369 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SH2D3CQ8N5H7 860 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 BADQ92934 168 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 CPNE1Q99829 537 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 NMRAL1Q9HBL8 299 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ETNK1Q9HBU6 452 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PCDHGA4Q9Y5G9 962 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 A0A1W2PRU2 124 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 PWP1Q13610 501 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 BRMS1LQ5PSV4 323 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ACTRT1Q8TDG2 376 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SERPINB12Q96P63 405 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 TNKS2Q9H2K2 1166 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 KLHL3Q9UH77 587 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 FAF1Q9UNN5 650 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 Q9Y3F1 56 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 ZFP37Q9Y6Q3 630 aaPredicted RBP10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
SYNPO2-201ENST00000307142 SPIDRQ14159 915 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PAGE2BQ5JRK9 111 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CENPLQ8N0S6 344 aaPredicted RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PAFAH2Q99487 392 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PPIEQ9UNP9 301 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ENTPD4Q9Y227 616 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 A0A0B4J269 797 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 H3BMM5 538 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 DDX3XO00571 662 aaKnown RBP eCLIP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 KPNA5O15131 536 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 LYPLA2O95372 231 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ERBB2P04626 1255 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 SP2Q02086 613 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 GAD2Q05329 585 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM151BQ6UXP7 276 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 MILR1Q7Z6M3 343 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PARGQ86W56 976 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PHF21AQ96BD5 680 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ACBD6Q9BR61 282 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 B3GNT5Q9BYG0 378 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ADNPQ9H2P0 1102 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PARVBQ9HBI1 364 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 MYH11P35749 1972 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CLUHO75153 1309 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 LRRC72A6NJI9 287 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 TMEM114B3SHH9 223 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CDH2P19022 906 aaPredicted RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 IL2P60568 153 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CAP1Q01518 475 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 PRDM16Q9HAZ2 1276 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 NAV1Q8NEY1 1877 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ATRNL1Q5VV63 1379 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ALFQ53S48 1182 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 OTOP3Q7RTS5 596 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 ALLCQ8N6M5 410 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 EPS8L1Q8TE68 723 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 DHX33Q9H6R0 707 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CDHR5Q9HBB8 845 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 KLF15Q9UIH9 416 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 GTF2A1LQ9UNN4 478 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 MTO1Q9Y2Z2 717 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CPQQ9Y646 472 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 H3BM21 787 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 HS6ST1O60243 411 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CLDN11O75508 207 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 DHPSP49366 369 aaPredicted RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC25A52Q3SY17 297 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 C2orf27AQ580R0 203 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms