RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 JUNDP17535 347 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
SMIM4-201ENST00000307106 Q6ZVU0 165 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 B3GNT8Q7Z7M8 397 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 SLC35F3Q8IY50 421 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 ERCC4Q92889 916 aaPredicted RBP12.15□□□□□ -0.46
SMIM4-201ENST00000307106 GLMNQ92990 594 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 FAXDC2Q96IV6 333 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 BOCQ9BWV1 1114 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 ADNPQ9H2P0 1102 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 KCTD10Q9H3F6 313 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 XPO7Q9UIA9 1087 aaKnown RBP12.15□□□□□ -0.46
SMIM4-201ENST00000307106 KLF15Q9UIH9 416 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 ZFR2Q9UPR6 939 aaKnown RBP12.15□□□□□ -0.46
SMIM4-201ENST00000307106 TLR6Q9Y2C9 796 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 HS3ST3A1Q9Y663 406 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 DOCK4Q8N1I0 1966 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 POM121BA6NF01 834 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 KPNA3O00505 521 aaPredicted RBP12.14□□□□□ -0.47
SMIM4-201ENST00000307106 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
SMIM4-201ENST00000307106 PDXKO00764 312 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 SPTLC2O15270 562 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 ATP9BO43861 1147 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 LTFP02788 710 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 JMJD7P0C870 316 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 SETSIPP0DME0 302 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 WT1P19544 449 aaPredicted RBP12.14□□□□□ -0.47
SMIM4-201ENST00000307106 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
SMIM4-201ENST00000307106 PLK1P53350 603 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 NUCB2P80303 420 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 STK4Q13043 487 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 CUL4BQ13620 913 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 MORC3Q14149 939 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 DLG2Q15700 870 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 HIST2H2BCQ6DN03 193 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 CHSY1Q86X52 802 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 IRGQQ8WZA9 623 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 SERPINB11Q96P15 392 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 STRADBQ9C0K7 418 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 PISDQ9UG56 409 aa12.14□□□□□ -0.47
SMIM4-201ENST00000307106 IPO11Q9UI26 975 aaKnown RBP12.14□□□□□ -0.47
SMIM4-201ENST00000307106 ANKRD36A6QL64 1941 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 TMX2-CTNND1H3BSU7 103 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 MAPK13O15264 365 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 GABBR2O75899 941 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 CTSLP07711 333 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 CD19P15391 556 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 TACR2P21452 398 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 CASRP41180 1078 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 RABIFP47224 123 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 RGS7P49802 495 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 PDE1CQ14123 709 aaPredicted RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 NCAPHQ15003 741 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 STK38Q15208 465 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 TMEM259Q4ZIN3 620 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 CIR1Q86X95 450 aaPredicted RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 CCAR2Q8N163 923 aaKnown RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 DQX1Q8TE96 717 aaKnown RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 CLEC4CQ8WTT0 213 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 SEMA4DQ92854 862 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 RNF34Q969K3 372 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 SLC39A13Q96H72 371 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 PPP1R13BQ96KQ4 1090 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 TMEM8AQ9HCN3 771 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 DYRK4Q9NR20 520 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 SPASTQ9UBP0 616 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 ANAPC2Q9UJX6 822 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
SMIM4-201ENST00000307106 ARHGEF17Q96PE2 2063 aaPredicted RBP12.13□□□□□ -0.47
SMIM4-201ENST00000307106 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 D6RAR5 112 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 F5H5T6 163 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 RAD51BO15315 384 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
SMIM4-201ENST00000307106 SPINT1O43278 529 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 PRAMEF10O60809 474 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 PAK4O96013 591 aaPredicted RBP12.12□□□□□ -0.47
SMIM4-201ENST00000307106 APOEP02649 317 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 KRT13P13646 458 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
SMIM4-201ENST00000307106 ITIH1P19827 911 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 PDCP20941 246 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 NNTQ13423 1086 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 C1orf61Q13536 156 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 FGL2Q14314 439 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 KRT39Q6A163 491 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 CXorf57Q6NSI4 855 aaKnown RBP12.12□□□□□ -0.47
SMIM4-201ENST00000307106 ESRP1Q6NXG1 681 aaKnown RBP12.12□□□□□ -0.47
SMIM4-201ENST00000307106 BORAQ6PGQ7 559 aa12.12□□□□□ -0.47
SMIM4-201ENST00000307106 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms