RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 NETO1Q8TDF5 533 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 SH3RF2Q8TEC5 729 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 PRCCQ92733 491 aaPredicted RBP8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 TACO1Q9BSH4 297 aaKnown RBP8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 ECT2Q9H8V3 914 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 ABCF3Q9NUQ8 709 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 KLHL11Q9NVR0 708 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 SIX4Q9UIU6 781 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 ITGA11Q9UKX5 1188 aa8.05□□□□□ -1.12
TM4SF1-201ENST00000305366 F5P12259 2224 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 LRRD1A4D1F6 860 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 E7ESA3 106 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 TRDMT1O14717 391 aaKnown RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 SLC30A4O14863 429 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 LRCH4O75427 683 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 UBOX5O94941 541 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 USP17L7P0C7H9 530 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 ZSCAN5DPP0CG00 497 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 KRT3P12035 628 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 PSMA2P25787 234 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 DDX6P26196 483 aaKnown RBP eCLIP8.04□□□□□ -1.123e-11■■□□□ 12.7
TM4SF1-201ENST00000305366 PCSK1P29120 753 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 WEE1P30291 646 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 SLC8A1P32418 973 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 RDXP35241 583 aaKnown RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 GABRB2P47870 512 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 LHX1P48742 406 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 DGKEP52429 567 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 PDGFRLQ15198 375 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 TMED2Q15363 201 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 ZRSR2Q15696 482 aaKnown RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 ZNF394Q53GI3 561 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 C2orf27AQ580R0 203 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 WLSQ5T9L3 541 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 TCEAL6Q6IPX3 200 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 DENND1BQ6P3S1 775 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 PRUNE1Q86TP1 453 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 PPIL6Q8IXY8 311 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 TMEM86AQ8N2M4 240 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 CPA6Q8N4T0 437 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 CCDC33Q8N5R6 958 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 ARFGAP1Q8N6T3 406 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 LRRC52Q8N7C0 313 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 OR6B3Q8NGW1 331 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 TCEAL3Q969E4 200 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 MYLPFQ96A32 169 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 SYT15Q9BQS2 421 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 MRPL45Q9BRJ2 306 aaKnown RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 RSPH9Q9H1X1 276 aaPredicted RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 SNX25Q9H3E2 840 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 CYP3A43Q9HB55 503 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 SMPD4Q9NXE4 827 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 UXTQ9UBK9 157 aaPredicted RBP8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 STARD13Q9Y3M8 1113 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 CEP250Q9BV73 2442 aa8.04□□□□□ -1.12
TM4SF1-201ENST00000305366 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 VGLL3A8MV65 326 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 SGK1O00141 431 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 PAPSS2O95340 614 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 ETS1P14921 441 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 KDELR1P24390 212 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 ATICP31939 592 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 RFC1P35251 1148 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 GNL1P36915 607 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 RAD23BP54727 409 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 ARL4CP56559 192 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 NCALDP61601 193 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 USP46P62068 366 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 CREB5Q02930 508 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 SPARCL1Q14515 664 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 PREPLQ4J6C6 727 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 ZNF667Q5HYK9 610 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 MDH1BQ5I0G3 518 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 CGB2Q6NT52 195 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 XYLT1Q86Y38 959 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 TOP6BLQ8N6T0 577 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 NAT8LQ8N9F0 302 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 GDAP1Q8TB36 358 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 ACTL9Q8TC94 416 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 OSCP1Q8WVF1 389 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 TMEM121Q9BTD3 319 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 DHRS4Q9BTZ2 278 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 TPSD1Q9BZJ3 242 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 TRABDQ9H4I3 376 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 YY1AP1Q9H869 796 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 KIF9Q9HAQ2 790 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 CRTAC1Q9NQ79 661 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 GDAP2Q9NXN4 497 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 PSMC3IPQ9P2W1 217 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 TBK1Q9UHD2 729 aa8.03□□□□□ -1.12
TM4SF1-201ENST00000305366 SPTBN2O15020 2390 aa8.02□□□□□ -1.12
TM4SF1-201ENST00000305366 FOXO6A8MYZ6 492 aa8.02□□□□□ -1.13
TM4SF1-201ENST00000305366 APOC4-APOC2K7ER74 178 aa8.02□□□□□ -1.13
TM4SF1-201ENST00000305366 CLDN5O00501 218 aa8.02□□□□□ -1.13
TM4SF1-201ENST00000305366 GABRDO14764 452 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms