RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 STOML2Q9UJZ1 356 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 SOX13Q9UN79 622 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 INSL6Q9Y581 213 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 TRIM49D1C9J1S8 452 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 TEX28O15482 410 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 PIAS1O75925 651 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 STC2O76061 302 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 FGF18O76093 207 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 FGBP02675 491 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 OR1E1P30953 314 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 RPA3P35244 121 aaPredicted RBP10.79□□□□□ -0.68
CLP1-201ENST00000302731 ADRA1AP35348 466 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 CRADDP78560 199 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 PPARDQ03181 441 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 SERINC3Q13530 473 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 PDK4Q16654 411 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 CHST9Q7L1S5 443 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 PIGWQ7Z7B1 504 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 UBE2Q1Q7Z7E8 422 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 TAX1BP1Q86VP1 789 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 LRRC34Q8IZ02 419 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLP1-201ENST00000302731 ACMSDQ8TDX5 336 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 USP33Q8TEY7 942 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 KIFC1Q9BW19 673 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 KLF16Q9BXK1 252 aaPredicted RBP10.79□□□□□ -0.68
CLP1-201ENST00000302731 FAM107BQ9H098 131 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 MAGEH1Q9H213 219 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 RABEP2Q9H5N1 569 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 ARNT2Q9HBZ2 717 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 MRM3Q9HC36 420 aaKnown RBP10.79□□□□□ -0.68
CLP1-201ENST00000302731 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
CLP1-201ENST00000302731 PTPRSQ13332 1948 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 ZCWPW2A0A1B0GU75 182 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 LPXNO60711 386 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 USP12O75317 370 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 CLDN11O75508 207 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 OLFM2O95897 454 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 F11P03951 625 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 VIMP08670 466 aaKnown RBP10.78□□□□□ -0.68
CLP1-201ENST00000302731 ALADP13716 330 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 NEK3P51956 506 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 LBX1P52954 281 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 C1QTNF8P60827 252 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 SEPT7Q16181 437 aaKnown RBP10.78□□□□□ -0.68
CLP1-201ENST00000302731 ANKRD20A4Q4UJ75 823 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 PCID2Q5JVF3 399 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 ADGRF1Q5T601 910 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 RANBP10Q6VN20 620 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 C16orf59Q7L2K0 433 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 CACNA2D3Q8IZS8 1091 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 LGI2Q8N0V4 545 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
CLP1-201ENST00000302731 GRAMD1AQ96CP6 724 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 IMP4Q96G21 291 aaKnown RBP10.78□□□□□ -0.68
CLP1-201ENST00000302731 SERAC1Q96JX3 654 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 TGS1Q96RS0 853 aaKnown RBP10.78□□□□□ -0.68
CLP1-201ENST00000302731 CPNE1Q99829 537 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 TRIM56Q9BRZ2 755 aaKnown RBP10.78□□□□□ -0.68
CLP1-201ENST00000302731 VPS11Q9H270 941 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 ZFATQ9P243 1243 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 LZTS1Q9Y250 596 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 IRAK3Q9Y616 596 aa10.78□□□□□ -0.68
CLP1-201ENST00000302731 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.77□□□□□ -0.68
CLP1-201ENST00000302731 GOLGA6L7A0A1B0GV03 622 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 TCP11X1B4DZS4 312 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 J3KR12 359 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 PRAMEF11O60813 436 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 RFPL1O75677 317 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 MT-CYBP00156 380 aaPredicted RBP10.77□□□□□ -0.68
CLP1-201ENST00000302731 DHRS4L1P0CG22 281 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 PFKLP17858 780 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 TAC1P20366 129 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 CORO1AP31146 461 aaKnown RBP10.77□□□□□ -0.68
CLP1-201ENST00000302731 SLC6A4P31645 630 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 GP5P40197 560 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 FPGSQ05932 587 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 ITIH4Q14624 930 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 SLC1A5Q15758 541 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 SLC14A2Q15849 920 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 QPCTQ16769 361 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 CERCAMQ5T4B2 595 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 GRTP1Q5TC63 336 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 TMCO4Q5TGY1 634 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 HHATQ5VTY9 493 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 ALG1LQ6GMV1 187 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 DENND5AQ6IQ26 1287 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 PSRC1Q6PGN9 363 aaPredicted RBP10.77□□□□□ -0.68
CLP1-201ENST00000302731 LILRA6Q6PI73 481 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 KDELC1Q6UW63 502 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 PACS1Q6VY07 963 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 CCDC149Q6ZUS6 474 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 RTL10Q7L3V2 364 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 YTHDF3Q7Z739 585 aaKnown RBP10.77□□□□□ -0.68
CLP1-201ENST00000302731 TMEM150AQ86TG1 271 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 SETD3Q86TU7 594 aaPredicted RBP10.77□□□□□ -0.68
CLP1-201ENST00000302731 HERC6Q8IVU3 1022 aa10.77□□□□□ -0.68
CLP1-201ENST00000302731 ANKS4BQ8N8V4 417 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms