RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TDP1Q9NUW8 608 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 DZANK1Q9NVP4 752 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 TBC1D30Q9Y2I9 924 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 NOTCH4Q99466 2003 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 E2F8A0AVK6 867 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 PRAMEF11O60813 436 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 AP2A1O95782 977 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ELK3P41970 407 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 CDH18Q13634 790 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 KCNC3Q14003 757 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 SPARCL1Q14515 664 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 KRT71Q3SY84 523 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 CCDC38Q502W7 563 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ATP11CQ8NB49 1132 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 SPON2Q9BUD6 331 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MLPHQ9BV36 600 aaPredicted RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MUC3BQ9H195 1237 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 LRRC4CQ9HCJ2 640 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ATP13A1Q9HD20 1204 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ERI2A8K979 691 aaKnown RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ABHD2P08910 425 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 HOXD9P28356 352 aaPredicted RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MAGEA3P43357 314 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MMP13P45452 471 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 OXCT1P55809 520 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 SLC10A7Q0GE19 358 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 MPPE1Q53F39 396 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 RARS2Q5T160 578 aaKnown RBP13.24□□□□□ -0.29
CCDC7-202ENST00000302316 TMCO4Q5TGY1 634 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 LRRC8BQ6P9F7 803 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 TPGS1Q6ZTW0 290 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 RIN3Q8TB24 985 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ITFG1Q8TB96 612 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 ZSWIM3Q96MP5 696 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 FCRL5Q96RD9 977 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 NT5MQ9NPB1 228 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 UBP1Q9NZI7 540 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 TEX264Q9Y6I9 313 aa13.24□□□□□ -0.29
CCDC7-202ENST00000302316 A0A087WUV0 522 aaPredicted RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 GOLGA8KD6RF30 607 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 CACNG3O60359 315 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 RNF40O75150 1001 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 MLNP12872 115 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 ETFBP38117 255 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 ITKQ08881 620 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 OLIG2Q13516 323 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 LBRQ14739 615 aaKnown RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 RNF219Q5W0B1 726 aaPredicted RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 MFN1Q8IWA4 741 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 PALM2Q8IXS6 379 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 AGGF1Q8N302 714 aaeCLIP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 TEX26Q8N6G2 289 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 SPATA22Q8NHS9 363 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 OXNAD1Q96HP4 312 aaPredicted RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 LRRC40Q9H9A6 602 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 PDFQ9HBH1 243 aa13.23□□□□□ -0.29
CCDC7-202ENST00000302316 PIH1D1Q9NWS0 290 aaKnown RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 AAR2Q9Y312 384 aaKnown RBP13.23□□□□□ -0.29
CCDC7-202ENST00000302316 SMIM23A6NLE4 172 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 USP12O75317 370 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ANXA9O76027 345 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 SUN1O94901 812 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 PAPLNO95428 1278 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 CPP00450 1065 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 CYBBP04839 570 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 PHBP35232 272 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 IFNAR2P48551 515 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 SESN2P58004 480 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 MAXP61244 160 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 USP4Q13107 963 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 CBLBQ13191 982 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF235Q14590 738 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF77Q15935 545 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 FSCBQ5H9T9 825 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF783Q6ZMS7 281 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 IGDCC3Q8IVU1 814 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ARID3BQ8IVW6 561 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 CCDC117Q8IWD4 279 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF599Q96NL3 588 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 PLK2Q9NYY3 685 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 CHD5Q8TDI0 1954 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms