RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SLC22A17Q8WUG5 538 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 CASS4Q9NQ75 786 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 HAUS2Q9NVX0 235 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 EURLQ9NYK6 297 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 BFARQ9NZS9 450 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 SAMD15Q9P1V8 674 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 ZNF510Q9Y2H8 683 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 IKBKGQ9Y6K9 419 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 MTCL1Q9Y4B5 1905 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 PEX11BO96011 259 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 PTPN2P17706 415 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 PGAM1P18669 254 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 MGAT1P26572 445 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 GCAP28676 217 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 HOXA9P31269 272 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 MSH2P43246 934 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 GNA12Q03113 381 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 TMED2Q15363 201 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 UNC5AQ6ZN44 842 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 MPP5Q8N3R9 675 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 OR52K1Q8NGK4 314 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 OXNAD1Q96HP4 312 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 ZNF599Q96NL3 588 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 PCDHA11Q9Y5I1 949 aa16.01■□□□□ 0.15
HERPUD1-201ENST00000300302 ILVBLA1L0T0 632 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 H3BNC9 293 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 PRAMEF11O60813 436 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.153e-7■■□□□ 14.5
HERPUD1-201ENST00000300302 IRS1P35568 1242 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 ACVRL1P37023 503 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 ETFBP38117 255 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 NPY2RP49146 381 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 TNK2Q07912 1038 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 CDH17Q12864 832 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 CAMK1Q14012 370 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 KBTBD12Q3ZCT8 623 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 IL31Q6EBC2 164 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 ELMSAN1Q6PJG2 1045 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 EXOC3L1Q86VI1 746 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 TEX26Q8N6G2 289 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 LEMD2Q8NC56 503 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 WBP2Q969T9 261 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 PAFAH2Q99487 392 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 SLC25A51Q9H1U9 297 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 UBP1Q9NZI7 540 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 SH3BP1Q9Y3L3 701 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 ACTL7BQ9Y614 415 aa16■□□□□ 0.15
HERPUD1-201ENST00000300302 TSPAN3O60637 253 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 CLASP2O75122 1294 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 XYLBO75191 536 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 USP12O75317 370 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 RHOCP08134 193 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 HNRNPA1P09651 372 aaKnown RBP eCLIP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 PRKCHP24723 683 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 PBX2P40425 430 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 EPHA5P54756 1037 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 SLC10A7Q0GE19 358 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 GPM6BQ13491 265 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ADGRD1Q6QNK2 874 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 Q6ZNB5 142 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 CYS1Q717R9 158 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 CYP4X1Q8N118 509 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 BBS5Q8N3I7 341 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 HJURPQ8NCD3 748 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 SPATA22Q8NHS9 363 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ADAMTS19Q8TE59 1207 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 MRRFQ96E11 262 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ZNF419Q96HQ0 510 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 DHRS4Q9BTZ2 278 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 NT5MQ9NPB1 228 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 PIH1D1Q9NWS0 290 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 SYBUQ9NX95 663 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 SENP1Q9P0U3 644 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 TBC1D30Q9Y2I9 924 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 DENND4CQ5VZ89 1909 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 MAGEB16A2A368 324 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 SHOX2O60902 331 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 POLBP06746 335 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 INHBAP08476 426 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 KRT15P19012 456 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 MDH1P40925 334 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ERVK-21P61565 698 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ITKQ08881 620 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 MPP3Q13368 585 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 LBRQ14739 615 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 EFTUD2Q15029 972 aaKnown RBP eCLIP15.99■□□□□ 0.158e-9■■■■□ 19.7
HERPUD1-201ENST00000300302 ARHGAP15Q53QZ3 475 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 STEAP4Q687X5 459 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ZNF783Q6ZMS7 281 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 HTR3DQ70Z44 454 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 ARNTL2Q8WYA1 636 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 GDF15Q99988 308 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 TBL1YQ9BQ87 522 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 SELENOSQ9BQE4 189 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 FSD1LQ9BXM9 530 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 IL22Q9GZX6 179 aa15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 YBX2Q9Y2T7 364 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-201ENST00000300302 GREM1O60565 184 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms