RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SMU1Q2TAY7 513 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 ULK3Q6PHR2 472 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 ALYREFQ86V81 257 aaKnown RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 RFT1Q96AA3 541 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 TIMMDC1Q9NPL8 285 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 MAP10Q9P2G4 905 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 DGKBQ9Y6T7 804 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 PXDNLA1KZ92 1463 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 BTN3A1O00481 513 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 SNRPB2P08579 225 aaKnown RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 ZSCAN5DPP0CG00 497 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 PPATQ06203 517 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 RBBP4Q09028 425 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 PEX5LQ8IYB4 626 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 COPS4Q9BT78 406 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 SLC35C2Q9NQQ7 365 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 TRPM5Q9NZQ8 1165 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 DYNC1LI2O43237 492 aaPredicted RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 OR6A2O95222 327 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 LSM8O95777 96 aaKnown RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 MMP10P09238 476 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 GARTP22102 1010 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 PRR5LQ6MZQ0 368 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 MTSS1LQ765P7 747 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 SYT12Q8IV01 421 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 HTR3CQ8WXA8 447 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 TCF12Q99081 682 aa15.06■□□□□ 0
SCN3B-201ENST00000299333 MTF2Q9Y483 593 aaPredicted RBP15.06■□□□□ 0
SCN3B-201ENST00000299333 USP12O75317 370 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 CCR1P32246 355 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 CRATP43155 626 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 MED22Q15528 200 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 AADACL2Q6P093 401 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 CARNMT1Q8N4J0 409 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 ERLEC1Q96DZ1 483 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 ADGRE3Q9BY15 652 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 CISHQ9NSE2 258 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 RAPGEFL1Q9UHV5 662 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 ARHGEF40Q8TER5 1519 aa15.05■□□□□ 0
SCN3B-201ENST00000299333 TCEA3O75764 348 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 CST1P01037 141 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 COX7A2P14406 83 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 RASA1P20936 1047 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 FAM187BQ17R55 369 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 TYSND1Q2T9J0 566 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 FAM47BQ8NA70 645 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 SMYD1Q8NB12 490 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 ISCA1Q9BUE6 129 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 UPP2O95045 317 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 APOL3O95236 402 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 CHRNGP07510 517 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 ERVK-10P10266 1014 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 PRG2P13727 222 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 ACAP2Q15057 778 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 LPCAT1Q8NF37 534 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 ELMO3Q96BJ8 720 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 MAGEB10Q96LZ2 347 aaPredicted RBP15.05■□□□□ -0
SCN3B-201ENST00000299333 SP140LQ9H930 580 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 NOTUMQ6P988 496 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 PHACTR4Q8IZ21 702 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 OR8H1Q8NGG4 311 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 AP3S1Q92572 193 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 SERAC1Q96JX3 654 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 TOR3AQ9H497 397 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 AHSPQ9NZD4 102 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 WDR37Q9Y2I8 494 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 MADDQ8WXG6 1647 aa15.05■□□□□ -0
SCN3B-201ENST00000299333 RGSL1A5PLK6 1076 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 DPPA5A6NC42 116 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 SQLEQ14534 574 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 DSG4Q86SJ6 1040 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 SENP6Q9GZR1 1112 aaPredicted RBP15.04■□□□□ -0
SCN3B-201ENST00000299333 TAS2R13Q9NYV9 303 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 QRICH2Q9H0J4 1663 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 ZNF879B4DU55 563 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 DYRK3O43781 588 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 MYBL2P10244 700 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 CYP4B1P13584 511 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 BCAT1P54687 386 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 RAB25P57735 213 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 BST2Q10589 180 aaKnown RBP15.04■□□□□ -0
SCN3B-201ENST00000299333 TBX2Q13207 712 aaPredicted RBP15.04■□□□□ -0
SCN3B-201ENST00000299333 ZNF438Q7Z4V0 828 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 ABRAQ8N0Z2 381 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 GSTCDQ8NEC7 633 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 CGRRF1Q99675 332 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 SSR3Q9UNL2 185 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 SRRM3A6NNA2 597 aaPredicted RBP15.04■□□□□ -0
SCN3B-201ENST00000299333 TRDMT1O14717 391 aaKnown RBP15.04■□□□□ -0
SCN3B-201ENST00000299333 NTRK1P04629 796 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 HNMTP50135 292 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 RHOAP61586 193 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 USP7Q93009 1102 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 NYAP2Q9P242 653 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 KIAA1257Q9ULG3 409 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 UBQLN1Q9UMX0 589 aaKnown RBP15.04■□□□□ -0
SCN3B-201ENST00000299333 DAGLAQ9Y4D2 1042 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 RRN3P2A6NIE6 340 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 PDE2AO00408 941 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms