RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 UPP1Q16831 310 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PACS1Q6VY07 963 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 RNF135Q8IUD6 432 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ATAD1Q8NBU5 361 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 MIPOL1Q8TD10 442 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 DQX1Q8TE96 717 aaKnown RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 BFARQ9NZS9 450 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ZNF711Q9Y462 761 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 BPTFQ12830 3046 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 LOC100653049A0A140TA62 436 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 FCHO1O14526 889 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 BUD23O43709 281 aaKnown RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ATP5HO75947 161 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 KRT34O76011 436 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ALDOAP04075 364 aaKnown RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 POLBP06746 335 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 HNRNPCP07910 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ITGA2BP08514 1039 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ETV4P43268 484 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CHRNA4P43681 627 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CXCR3P49682 368 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 GATMP50440 423 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 COG7P83436 770 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 STX3Q13277 289 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ITGA9Q13797 1035 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PDE1CQ14123 709 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CIR1Q86X95 450 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ZNF276Q8N554 614 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 FBXO27Q8NI29 283 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PIP4K2CQ8TBX8 421 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PABPC5Q96DU9 382 aaKnown RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 VCX3BQ9H321 246 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 VCX3AQ9NNX9 186 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 DNAJB4Q9UDY4 337 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 NEMP1O14524 444 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 GABRDO14764 452 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 AOC2O75106 756 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SUPT3HO75486 399 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SPAG6O75602 509 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ZMPSTE24O75844 475 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 NCF2P19878 526 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CTBP1Q13363 440 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 FAM219BQ5XKK7 198 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CRLF3Q8IUI8 442 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 C10orf107Q8IVU9 208 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PLD6Q8N2A8 252 aaKnown RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SDR16C5Q8N3Y7 309 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PYDC1Q8WXC3 89 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ARNTL2Q8WYA1 636 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 MPP4Q96JB8 637 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SCYL1Q96KG9 808 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 KLHL5Q96PQ7 755 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ZNF184Q99676 751 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 RTP3Q9BQQ7 232 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 OXCT2Q9BYC2 517 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SENP6Q9GZR1 1112 aaPredicted RBP10.29□□□□□ -0.76
FOXN4-201ENST00000299162 TMEM216Q9P0N5 145 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 FBXW11Q9UKB1 542 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 DNAJC16Q9Y2G8 782 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CDH23Q9H251 3354 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CCDC22O60826 627 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 LYNP07948 512 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 NMBRP28336 390 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 LRPAP1P30533 357 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 SERPINB6P35237 376 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 CCR10P46092 362 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 SLC5A3P53794 718 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 TSPY1Q01534 308 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 YWHAHQ04917 246 aaPredicted RBP10.28□□□□□ -0.76
FOXN4-201ENST00000299162 DYNC1I2Q13409 638 aaKnown RBP10.28□□□□□ -0.76
FOXN4-201ENST00000299162 RASA2Q15283 850 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 PARP6Q2NL67 630 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 SPATA24Q86W54 205 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 SH3TC2Q8TF17 1288 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 SOCS4Q8WXH5 440 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 RTP4Q96DX8 246 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 PNPOQ9NVS9 261 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 GOLGA8QA0A0J9YX86 632 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 GOLGA8OA6NCC3 632 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 GOLGA8NF8WBI6 632 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 PDLIM1O00151 329 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 NDUFB5O43674 189 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 E2F6O75461 281 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 C1QAP02745 245 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 PRKCHP24723 683 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 FDFT1P37268 417 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 EFEMP1Q12805 493 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 LPIN1Q14693 890 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 LBRQ14739 615 aaKnown RBP10.28□□□□□ -0.76
FOXN4-201ENST00000299162 GRAMD1BQ3KR37 738 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 SLC15A3Q8IY34 581 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 DCLK2Q8N568 766 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 CASP10Q92851 521 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 CERS2Q96G23 380 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 DMAP1Q9NPF5 467 aaPredicted RBP10.28□□□□□ -0.76
FOXN4-201ENST00000299162 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
FOXN4-201ENST00000299162 ATXN10Q9UBB4 475 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms