RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FZD8Q9H461 694 aa13.54□□□□□ -0.24
TNFRSF21-201ENST00000296861 NOL11Q9H8H0 719 aaKnown RBP13.54□□□□□ -0.24
TNFRSF21-201ENST00000296861 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
TNFRSF21-201ENST00000296861 NCF1BA6NI72 391 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 NCF1CA8MVU1 366 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 LGALS2P05162 132 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 FAM58BPP0C7Q3 252 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 NCF1P14598 390 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 AOC1P19801 751 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CRABP2P29373 138 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CDH5P33151 784 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CPOXP36551 454 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 MS4A2Q01362 244 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 IL1RL1Q01638 556 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 DCBLD1Q8N8Z6 715 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 LRTOMTQ8WZ04 291 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 LENG1Q96BZ8 264 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 FICDQ9BVA6 458 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 RHOBTB2Q9BYZ6 727 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 GMPR2Q9P2T1 348 aaKnown RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 ZNFX1Q9P2E3 1918 aaKnown RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CASQ2O14958 399 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 PIRTP0C851 137 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 UGT1A6P19224 532 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CHRNA4P43681 627 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 BCAT1P54687 386 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 LAMC2Q13753 1193 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 ITPRIPL1Q6GPH6 555 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 SH2D5Q6ZV89 423 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 UBR7Q8N806 425 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 JADE3Q92613 823 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 SORT1Q99523 831 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 RNF181Q9P0P0 153 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 ACOT9Q9Y305 439 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 ANKRD33BA6NCL7 494 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 KLF11O14901 512 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 HDAC3O15379 428 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 MAGEB3O15480 346 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 MAXP61244 160 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 PPIDQ08752 370 aaKnown RBP13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 FAM83EQ2M2I3 478 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 PRAMEF19Q5SWL8 479 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 IL23RQ5VWK5 629 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 POMKQ9H5K3 350 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 CRYL1Q9Y2S2 319 aa13.53□□□□□ -0.24
TNFRSF21-201ENST00000296861 COL4A5P29400 1685 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 GIPC1O14908 333 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 SNNO75324 88 aaPredicted RBP13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.244e-6■□□□□ 11.2
TNFRSF21-201ENST00000296861 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 GRIA3P42263 894 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 ZBTB49Q6ZSB9 765 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 TFAP2DQ7Z6R9 452 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 DCPSQ96C86 337 aaKnown RBP13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 ASB7Q9H672 318 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 CHCHD3Q9NX63 227 aaKnown RBP13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 BCAP29Q9UHQ4 241 aa13.52□□□□□ -0.24
TNFRSF21-201ENST00000296861 RGSL1A5PLK6 1076 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 C9IYK1 514 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 NR5A2O00482 541 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 BEST1O76090 585 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 PFKMP08237 780 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 HMBSP08397 361 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CES1P23141 567 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 GJA9P57773 515 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 STX1BP61266 288 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 NSUN2Q08J23 767 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CLVS1Q8IUQ0 354 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 FSTL5Q8N475 847 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CPNE1Q99829 537 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 WDCPQ9H6R7 721 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CDHR5Q9HBB8 845 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CPA4Q9UI42 421 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 ITGA11Q9UKX5 1188 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 LAMA3Q16787 3333 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 PDLIM1O00151 329 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 FAM189A1O60320 539 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 GCATO75600 419 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 MCF2P10911 925 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 CYP4V2Q6ZWL3 525 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 LPCAT2Q7L5N7 544 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 PSMD13Q9UNM6 376 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 DOLKQ9UPQ8 538 aa13.52□□□□□ -0.25
TNFRSF21-201ENST00000296861 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 NR4A1P22736 598 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms