RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 UCHL3P15374 230 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 CCINQ13939 588 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 TMEM94Q12767 1356 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 SLC28A2O43868 658 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 S100A3P33764 101 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 RPL21P46778 160 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 ARSHQ5FYA8 562 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 SVOPQ8N4V2 548 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 RNF148Q8N7C7 305 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 COLGALT1Q8NBJ5 622 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 CHID1Q9BWS9 393 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 EPB41L1Q9H4G0 881 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 FFAR3O14843 346 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 KIAA0391O15091 583 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 GPR42O15529 346 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 PGK1P00558 417 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 LHX1P48742 406 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 LSM3P62310 102 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 AMZ1Q400G9 498 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 TM6SF2Q9BZW4 377 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 UXTQ9UBK9 157 aaPredicted RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 OPTCQ9UBM4 332 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 UBDO15205 165 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 DPEP1P16444 411 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 GALNT3Q14435 633 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 RORBQ92753 470 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 STRBPQ96SI9 672 aaKnown RBP12.6□□□□□ -0.39
SLX4-201ENST00000294008 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 FAIM2Q9BWQ8 316 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 CYP3A43Q9HB55 503 aa12.6□□□□□ -0.39
SLX4-201ENST00000294008 RGS12O14924 1447 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 CDH16O75309 829 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 GCATO75600 419 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 SERPINA1P01009 418 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 PCCBP05166 539 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 FAM86B2P0C5J1 330 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 MNDAP41218 407 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 PSMD5Q16401 504 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
SLX4-201ENST00000294008 KAT2AQ92830 837 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 ACSM2AQ08AH3 577 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 MAD2L1Q13257 205 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 ZCWPW2Q504Y3 356 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 ACSM2BQ68CK6 577 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 SEMA4BQ9NPR2 832 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 HAO1Q9UJM8 370 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 CPDO75976 1380 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 PHGDHO43175 533 aaKnown RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 NDUFB10O96000 172 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 IST1P53990 364 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 TRIM40Q6P9F5 258 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 MTDHQ86UE4 582 aaKnown RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 ZNF280BQ86YH2 543 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 ELMO3Q96BJ8 720 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 SLC38A2Q96QD8 506 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 LRRC40Q9H9A6 602 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 BUD23O43709 281 aaKnown RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 SEMA3DO95025 777 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 ZNF16P17020 682 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 HOXA7P31268 230 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 PSMD7P51665 324 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 RGS8P57771 180 aaPredicted RBP12.59□□□□□ -0.39
SLX4-201ENST00000294008 ADIGQ0VDE8 80 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 BMPR2Q13873 1038 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 CCDC153Q494R4 210 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 HYIQ5T013 277 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 SLC9A4Q6AI14 798 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 LRRC6Q86X45 466 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 LPAR1Q92633 364 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 CKLFQ9UBR5 152 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 QSOX1O00391 747 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 C1orf189Q5VU69 101 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 ATG4AQ8WYN0 398 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 TMEM8AQ9HCN3 771 aa12.59□□□□□ -0.39
SLX4-201ENST00000294008 SLC28A1O00337 649 aa12.58□□□□□ -0.39
SLX4-201ENST00000294008 TBL1XO60907 577 aa12.58□□□□□ -0.39
SLX4-201ENST00000294008 KLRC1P26715 233 aa12.58□□□□□ -0.39
SLX4-201ENST00000294008 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.39
SLX4-201ENST00000294008 ING5Q8WYH8 240 aa12.58□□□□□ -0.39
SLX4-201ENST00000294008 REEP1Q9H902 201 aa12.58□□□□□ -0.39
SLX4-201ENST00000294008 ASAH2Q9NR71 780 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms